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3 Dee - Database of Protein Domain Definitions |
| Classes | % of representative set |
|---|---|
| undefined | 36.36 |
| Peptides | 15.15 |
| Alpha and beta (a+b) | 6.06 |
| All alpha | 42.42 |
| Breakdown into folds | % of cluster | % of class |
|---|---|---|
| undefined | ||
| undefined from 3Dee | 36.36 | 1.89 |
| Peptides | ||
| Ferredoxin chloroplastic transit peptide from 3Dee | 3.03 | 2.04 |
| Transmembrane helical fragments from 3Dee | 6.06 | 4.08 |
| two helices from 3Dee | 6.06 | 4.08 |
| Alpha and beta (a+b) | ||
Anti-LPS factor/recA domain | 3.03 | 0.52 |
| S-adenosylmethionine synthetase. MAT inner domain | 3.03 | 0.52 |
| All alpha | ||
| 4-helical cytokines fragment | 3.03 | 0.49 |
| Anticodon-binding (C-terminal) domain of glutamyl-tRNA Domain I from 3Dee | 3.03 | 0.49 |
| Helix-loop-helix DNA-binding domain | 3.03 | 0.49 |
| Immunoglobulin-binding protein A, fragment B from 3Dee | 3.03 | 0.49 |
| Long alpha-hairpin | 3.03 | 0.49 |
| Oligomers of long helices from 3Dee | 18.18 | 2.96 |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase domain from 3Dee | 6.06 | 0.99 |
| Pheromone proteins from 3Dee | 3.03 | 0.49 |
| 1vlk-2 | [seq. related domains] | All alpha |
4-helical cytokines fragment |
| 2recf-2 | [seq. related domains] | Alpha and beta (a+b) |
Anti-LPS factor/recA domain |
| 1gln-3 | [seq. related domains] | All alpha |
Anticodon-binding (C-terminal) domain of glutamyl-tRNA Domain I |
| 1fct-1 | [seq. related domains] | Peptides |
Ferredoxin chloroplastic transit peptide |
| 1zdd-1 | [seq. related domains] | All alpha |
Immunoglobulin-binding protein A, fragment B |
| 1sera-1 | [seq. related domains] | All alpha |
Long alpha-hairpin |
| 1ebdc-1 | [seq. related domains] | All alpha |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase domain |
| 1bbl-1 | [seq. related domains] | All alpha |
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase domain |
| 1erd-1 | [seq. related domains] | All alpha |
Pheromone proteins |
| 1fugb-4 | [seq. related domains] | Alpha and beta (a+b) |
S-adenosylmethionine synthetase. MAT inner domain |
| 1aty-1 | [seq. related domains] | Peptides |
Transmembrane helical fragments |
| 1pona-1 | [seq. related domains] | Peptides |
two helices |
| 1ponb-1 | [seq. related domains] | Peptides |
two helices |
| 1ery-1 | [seq. related domains] | undefined |
undefined |
| 1vii-1 | [seq. related domains] | undefined |
undefined |
| 1aqt-2 | [seq. related domains] | undefined |
undefined |
| 4hb1-1 | [seq. related domains] | undefined |
undefined |
| 1atic-1 | [seq. related domains] | undefined |
undefined |
| 2erl-1 | [seq. related domains] | undefined |
undefined |
| 1vpu-1 | [seq. related domains] | undefined |
undefined |
| 1abz-1 | [seq. related domains] | undefined |
undefined |
| 1prb-1 | [seq. related domains] | undefined |
undefined |
| 1cuk-3 | [seq. related domains] | undefined |
undefined |
| 1mdyb-1 | [seq. related domains] | All alpha |
Helix-loop-helix DNA-binding domain |
| 1a02f-1 | [seq. related domains] | All alpha |
Oligomers of long helices |
| 4ifm-1 | [seq. related domains] | All alpha |
Oligomers of long helices |
| 2ifo-1 | [seq. related domains] | All alpha |
Oligomers of long helices |
| 2dgca-1 | [seq. related domains] | All alpha |
Oligomers of long helices |
| 1scma-1 | [seq. related domains] | All alpha |
Oligomers of long helices |
| 1a02j-1 | [seq. related domains] | All alpha |
Oligomers of long helices |
| 1bct-1 | [seq. related domains] | Peptides |
Transmembrane helical fragments |
| 1av1d-1 | [seq. related domains] | undefined |
undefined |
| 1mof-1 | [seq. related domains] | undefined |
undefined |