3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 1.593

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Classes% of representative set
undefined 25.53
Small proteins 61.70
Peptides 12.77
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 25.53 1.89
Small proteins
Classic zinc finger from 3Dee 46.81 19.13
Insulin-like from SCOP 8.51 3.48
Metallothionein from SCOP 2.13 0.87
Rubredoxin-like from SCOP 2.13 0.87
Small inhibitors, toxins, lectins from 3Dee 2.13 0.87
Peptides
Coagulation factor VIII, membrane-binding peptide from 3Dee 2.13 2.04
Gelsolin fragment (residues 150-169) from 3Dee 2.13 2.04
Parathyroid hormone fragment (residues 1-37) from 3Dee 2.13 2.04
Protein kinases (PK) Inhibitor from 3Dee 4.26 4.08
RP71935 from 3Dee 2.13 2.04

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

7znf-1 [seq. related domains] Small proteins Classic zinc finger
1znf-1 [seq. related domains] Small proteins Classic zinc finger
1a1ja-3 [seq. related domains] Small proteins Classic zinc finger
1tf3a-1 [seq. related domains] Small proteins Classic zinc finger
1ubdc-1 [seq. related domains] Small proteins Classic zinc finger
1tf6d-1 [seq. related domains] Small proteins Classic zinc finger
1ubdc-3 [seq. related domains] Small proteins Classic zinc finger
1sp1-1 [seq. related domains] Small proteins Classic zinc finger
1tf3a-2 [seq. related domains] Small proteins Classic zinc finger
1ubdc-2 [seq. related domains] Small proteins Classic zinc finger
1tf3a-3 [seq. related domains] Small proteins Classic zinc finger
2adr-1 [seq. related domains] Small proteins Classic zinc finger
1ubdc-4 [seq. related domains] Small proteins Classic zinc finger
1arf-1 [seq. related domains] Small proteins Classic zinc finger
2adr-2 [seq. related domains] Small proteins Classic zinc finger
1tf6d-4 [seq. related domains] Small proteins Classic zinc finger
1sp2-1 [seq. related domains] Small proteins Classic zinc finger
1a1ja-1 [seq. related domains] Small proteins Classic zinc finger
1tf6d-5 [seq. related domains] Small proteins Classic zinc finger
1bbo-1 [seq. related domains] Small proteins Classic zinc finger
1tf6d-6 [seq. related domains] Small proteins Classic zinc finger
1znm-1 [seq. related domains] Small proteins Classic zinc finger
1fac-1 [seq. related domains] Peptides Coagulation factor VIII, membrane-binding peptide
1sol-1 [seq. related domains] Peptides Gelsolin fragment (residues 150-169)
1bonb-1 [seq. related domains] Small proteins Insulin-like
6rlxd-1 [seq. related domains] Small proteins Insulin-like
1bona-1 [seq. related domains] Small proteins Insulin-like
6rlxc-1 [seq. related domains] Small proteins Insulin-like
1zwg-1 [seq. related domains] Peptides Parathyroid hormone fragment (residues 1-37)
1fmoi-1 [seq. related domains] Peptides Protein kinases (PK) Inhibitor
1cdkj-1 [seq. related domains] Peptides Protein kinases (PK) Inhibitor
1kal-1 [seq. related domains] Small proteins Small inhibitors, toxins, lectins
1rmd-2 [seq. related domains] undefined undefined
1hcw-1 [seq. related domains] undefined undefined
1fsv-1 [seq. related domains] undefined undefined
3leu-1 [seq. related domains] undefined undefined
1dsl-1 [seq. related domains] undefined undefined
1ayn4-1 [seq. related domains] undefined undefined
1aie-1 [seq. related domains] undefined undefined
1alg-1 [seq. related domains] undefined undefined
1melb-2 [seq. related domains] undefined undefined
1p1p-1 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

4mt2-2 [seq. related domains] Small proteins Metallothionein
1rpc-1 [seq. related domains] Peptides RP71935
1med-1 [seq. related domains] Small proteins Rubredoxin-like
1fge-1 [seq. related domains] undefined undefined
1zfo-1 [seq. related domains] undefined undefined

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