3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 5.678

Ascend tree (bring in more domains)

Classes% of representative set
Peptides 80.00
All alpha 20.00
Breakdown into folds% of cluster % of class
Peptides
Antifreeze polypeptide HPLC-6 from 3Dee 60.00 12.24
Liposaccharide-binding protein CAP18 (residues 106-137) from 3Dee 10.00 2.04
Mellitin from 3Dee 10.00 2.04
All alpha
Oligomers of long helices from 3Dee 20.00 0.99

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1ltic-1 [seq. related domains] All alpha Oligomers of long helices

Cluster 1

Descend tree into cluster 1

1a2xb-1 [seq. related domains] Peptides Antifreeze polypeptide HPLC-6
1tiic-1 [seq. related domains] Peptides Antifreeze polypeptide HPLC-6
1coi-1 [seq. related domains] Peptides Antifreeze polypeptide HPLC-6
1htn-1 [seq. related domains] Peptides Antifreeze polypeptide HPLC-6
1wfbb-1 [seq. related domains] Peptides Antifreeze polypeptide HPLC-6
1toh-2 [seq. related domains] Peptides Antifreeze polypeptide HPLC-6
1lyp-1 [seq. related domains] Peptides Liposaccharide-binding protein CAP18 (residues 106-137)
1gp2a-1 [seq. related domains] Peptides Mellitin
1gcmc-1 [seq. related domains] All alpha Oligomers of long helices

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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