3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 4.150

Ascend tree (bring in more domains)

Classes% of representative set
undefined 25.00
Peptides 75.00
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 25.00 0.16
Peptides
Polymorphic antigen SPAM-H1 (residues 90-127) from 3Dee 25.00 2.04
Transmembrane helical fragments from 3Dee 50.00 4.08

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1psm-1 [seq. related domains] Peptides Polymorphic antigen SPAM-H1 (residues 90-127)

Cluster 1

Descend tree into cluster 1

1spf-1 [seq. related domains] Peptides Transmembrane helical fragments
1peh-1 [seq. related domains] Peptides Transmembrane helical fragments
1opp-1 [seq. related domains] undefined undefined

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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