3 Dee - Database of Protein Domain Definitions

The current cluster is formed at a score of 1.685

Ascend tree (bring in more domains)

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• Classes

• Small proteins folds
• undefined folds

• Cluster 1
• Cluster 2
• Cluster 3

Breakdown into folds	% of cluster	% of class
undefined
undefined from 3Dee	18.18	0.94
Small proteins
Defensin-like from SCOP	12.12	3.48
Neurotoxin III (ATX III) from SCOP	3.03	0.87
Small inhibitors, toxins, lectins from 3Dee	63.64	18.26
Trefoil from SCOP	3.03	0.87

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1ans-1	[seq. related domains]	Small proteins	Neurotoxin III (ATX III)
1agg-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1mvj-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1azk-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1gur-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1omn-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1wgtb-3	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1omg-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
2cco-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
4cpai-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1mcti-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1mmc-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1qdp-1	[seq. related domains]	undefined	undefined
1ag7-1	[seq. related domains]	undefined	undefined
2adx-1	[seq. related domains]	undefined	undefined
1ztn-1	[seq. related domains]	undefined	undefined
1axh-1	[seq. related domains]	undefined	undefined

Cluster 2

Descend tree into cluster 2

1bnb-1	[seq. related domains]	Small proteins	Defensin-like
1apf-1	[seq. related domains]	Small proteins	Defensin-like
1dfnb-1	[seq. related domains]	Small proteins	Defensin-like
2bds-1	[seq. related domains]	Small proteins	Defensin-like
1bi6h-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins

Cluster 3

Descend tree into cluster 3

1myn-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
2pta-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1scy-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1ica-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1ayj-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1lqq-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1chl-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1bah-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
1acw-1	[seq. related domains]	Small proteins	Small inhibitors, toxins, lectins
2pspb-2	[seq. related domains]	Small proteins	Trefoil
2brz-1	[seq. related domains]	undefined	undefined

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