3 Dee - Database of Protein Domain Definitions

[Search] [HELP]

The current cluster is formed at a score of 4.407

Ascend tree (bring in more domains)

Classes% of representative set
Small proteins 50.00
Alpha and beta (a+b) 50.00
Breakdown into folds% of cluster % of class
Small proteins
Rubredoxin-like from SCOP 50.00 0.87
Alpha and beta (a+b)
A DNA topoisomerase I domain from 3Dee 50.00 0.52

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1yua-1 [seq. related domains] Alpha and beta (a+b) A DNA topoisomerase I domain
1qyp-1 [seq. related domains] Small proteins Rubredoxin-like

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

3dee@compbio.dundee.ac.uk