3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 3.115

Ascend tree (bring in more domains)

Classes% of representative set
Small proteins 80.00
Alpha and beta (a+b) 20.00
Breakdown into folds% of cluster % of class
Small proteins
Complement control module from 3Dee 20.00 0.87
Fibronectin type I module from SCOP 40.00 1.74
Rubredoxin-like from SCOP 20.00 0.87
Alpha and beta (a+b)
A DNA topoisomerase I domain from 3Dee 20.00 0.52

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1yua-1 [seq. related domains] Alpha and beta (a+b) A DNA topoisomerase I domain
1qyp-1 [seq. related domains] Small proteins Rubredoxin-like

Cluster 2

Descend tree into cluster 2

1vve-1 [seq. related domains] Small proteins Complement control module
1tpn-1 [seq. related domains] Small proteins Fibronectin type I module
1fbr-2 [seq. related domains] Small proteins Fibronectin type I module

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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