3 Dee - Database of Protein Domain Definitions
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The current cluster is formed at a score of 3.284
Ascend tree (bring in more domains)
Classes
% of representative set
undefined
20.00
Alpha and beta (a+b)
60.00
All beta
20.00
Breakdown into folds
% of cluster
% of class
undefined
undefined from 3Dee
20.00
0.16
Alpha and beta (a+b)
Cystatin-like
from SCOP
20.00
0.52
RNA bacteriophage capsid protein
from SCOP
40.00
1.04
All beta
Streptavidin-like
from SCOP
20.00
0.45
It is formed by merging the following clusters
Cluster 1
Descend tree into cluster 1
1udii-1
[
seq. related domains
]
Alpha and beta (a+b)
Cystatin-like
1swgd-1
[
seq. related domains
]
All beta
Streptavidin-like
1ospo-2
[
seq. related domains
]
undefined
undefined
Cluster 2
Descend tree into cluster 2
1mvbc-1
[
seq. related domains
]
Alpha and beta (a+b)
RNA bacteriophage capsid protein
1qbec-1
[
seq. related domains
]
Alpha and beta (a+b)
RNA bacteriophage capsid protein
View superpositions of "checked" domains
Enter PDB code - optionally suffixing the code with the chain id.
3dee@compbio.dundee.ac.uk