3 Dee - Database of Protein Domain Definitions


[Search] [HELP]

The current cluster is formed at a score of 3.284

Ascend tree (bring in more domains)

Classes% of representative set
undefined 20.00
Alpha and beta (a+b) 60.00
All beta 20.00
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 20.00 0.16
Alpha and beta (a+b)
Cystatin-like from SCOP 20.00 0.52
RNA bacteriophage capsid protein from SCOP 40.00 1.04
All beta
Streptavidin-like from SCOP 20.00 0.45

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1udii-1 [seq. related domains] Alpha and beta (a+b) Cystatin-like
1swgd-1 [seq. related domains] All beta Streptavidin-like
1ospo-2 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1mvbc-1 [seq. related domains] Alpha and beta (a+b) RNA bacteriophage capsid protein
1qbec-1 [seq. related domains] Alpha and beta (a+b) RNA bacteriophage capsid protein

View superpositions of "checked" domains


Enter PDB code - optionally suffixing the code with the chain id.


3dee@compbio.dundee.ac.uk