3 Dee - Database of Protein Domain Definitions


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The current cluster is formed at a score of 1.700

Ascend tree (bring in more domains)

Classes% of representative set
undefined 7.69
Alpha and beta (a+b) 84.62
All beta 7.69
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 7.69 0.16
Alpha and beta (a+b)
Cystatin-like from SCOP 69.23 4.66
RNA bacteriophage capsid protein from SCOP 15.38 1.04
All beta
Streptavidin-like from SCOP 7.69 0.45

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1spub-2 [seq. related domains] Alpha and beta (a+b) Cystatin-like
1askb-1 [seq. related domains] Alpha and beta (a+b) Cystatin-like
1a90-1 [seq. related domains] Alpha and beta (a+b) Cystatin-like
1dvd-1 [seq. related domains] Alpha and beta (a+b) Cystatin-like
1ksib-1 [seq. related domains] Alpha and beta (a+b) Cystatin-like
1iskb-1 [seq. related domains] Alpha and beta (a+b) Cystatin-like
1spub-3 [seq. related domains] Alpha and beta (a+b) Cystatin-like
1std-1 [seq. related domains] Alpha and beta (a+b) Cystatin-like

Cluster 2

Descend tree into cluster 2

1udii-1 [seq. related domains] Alpha and beta (a+b) Cystatin-like
1mvbc-1 [seq. related domains] Alpha and beta (a+b) RNA bacteriophage capsid protein
1qbec-1 [seq. related domains] Alpha and beta (a+b) RNA bacteriophage capsid protein
1swgd-1 [seq. related domains] All beta Streptavidin-like
1ospo-2 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.


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