3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 3.253

Ascend tree (bring in more domains)

Classes% of representative set
Alpha and beta (a+b) 66.67
All alpha 33.33
Breakdown into folds% of cluster % of class
Alpha and beta (a+b)
A DNA topoisomerase I domain from 3Dee 66.67 1.04
All alpha
Lipoxigenase-1, A DNA topoisomerase I domain from 3Dee 33.33 0.49

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1yge-3 [seq. related domains] All alpha Lipoxigenase-1, A DNA topoisomerase I domain

Cluster 1

Descend tree into cluster 1

1yua-2 [seq. related domains] Alpha and beta (a+b) A DNA topoisomerase I domain
1vcc-1 [seq. related domains] Alpha and beta (a+b) A DNA topoisomerase I domain

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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