3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 3.382

Ascend tree (bring in more domains)

Classes% of representative set
undefined 33.33
Small proteins 33.33
All beta 33.33
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 33.33 0.16
Small proteins
Antifungal protein (AGAFP) from SCOP 33.33 0.87
All beta
Mu transposase, C-terminal domain from 3Dee 33.33 0.45

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1cko-2 [seq. related domains] undefined undefined

Cluster 1

Descend tree into cluster 1

1afp-1 [seq. related domains] Small proteins Antifungal protein (AGAFP)
1bcmb-2 [seq. related domains] All beta Mu transposase, C-terminal domain

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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