3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 2.825

Ascend tree (bring in more domains)

Classes% of representative set
undefined 53.85
Small proteins 7.69
All beta 38.46
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 53.85 1.10
Small proteins
Antifungal protein (AGAFP) from SCOP 7.69 0.87
All beta
Mu transposase, C-terminal domain from 3Dee 7.69 0.45
OB-fold from SCOP 30.77 1.79

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1afp-1 [seq. related domains] Small proteins Antifungal protein (AGAFP)
1bcmb-2 [seq. related domains] All beta Mu transposase, C-terminal domain
1cko-2 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

4ull-1 [seq. related domains] All beta OB-fold
1ae3-1 [seq. related domains] All beta OB-fold
1se4-2 [seq. related domains] All beta OB-fold
1mef-1 [seq. related domains] All beta OB-fold
1sro-1 [seq. related domains] undefined undefined
1a0i-2 [seq. related domains] undefined undefined
1pfsb-1 [seq. related domains] undefined undefined
1cuk-1 [seq. related domains] undefined undefined
2tssc-2 [seq. related domains] undefined undefined
1ah9-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

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