3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 0.569

Ascend tree (bring in more domains)

Classes% of representative set
undefined 63.64
Small proteins 9.09
Alpha and beta (a+b) 27.27
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 63.64 1.10
Small proteins
Small inhibitors, toxins, lectins from 3Dee 9.09 0.87
Alpha and beta (a+b)
Astacin domain II from 3Dee 9.09 0.52
FKBP-like from SCOP 9.09 0.52
P-loop containing nucleotide triphosphate hydrolases, inserted domain in Guanylate Kinase from 3Dee 9.09 0.52

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1ctn-3 [seq. related domains] Alpha and beta (a+b) FKBP-like
1gky-2 [seq. related domains] Alpha and beta (a+b) P-loop containing nucleotide triphosphate hydrolases, inserted domain in Guanylate Kinase
1prxb-2 [seq. related domains] undefined undefined
1whi-1 [seq. related domains] undefined undefined
1aqt-1 [seq. related domains] undefined undefined
1aonu-1 [seq. related domains] undefined undefined
1lci-3 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1iaa-1 [seq. related domains] Alpha and beta (a+b) Astacin domain II
2bbi-1 [seq. related domains] Small proteins Small inhibitors, toxins, lectins
1jrhl-2 [seq. related domains] undefined undefined
1jrhh-2 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

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