3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 2.438

Ascend tree (bring in more domains)

Classes% of representative set
undefined 30.00
Alpha and beta (a/b) 20.00
Alpha and beta (a+b) 50.00
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 30.00 0.47
Alpha and beta (a/b)
Nucleotidyltransferases Domain I from 3Dee 20.00 0.73
Alpha and beta (a+b)
S-adenosylmethionine synthetase. MAT outer domain from 3Dee 30.00 1.55
Tautomerase/MIF from SCOP 20.00 1.04

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1knyb-1 [seq. related domains] Alpha and beta (a/b) Nucleotidyltransferases Domain I
2bpgb-2 [seq. related domains] Alpha and beta (a/b) Nucleotidyltransferases Domain I
1fugb-2 [seq. related domains] Alpha and beta (a+b) S-adenosylmethionine synthetase. MAT outer domain
1fugb-1 [seq. related domains] Alpha and beta (a+b) S-adenosylmethionine synthetase. MAT outer domain
1fugb-3 [seq. related domains] Alpha and beta (a+b) S-adenosylmethionine synthetase. MAT outer domain
1lci-4 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1otgc-1 [seq. related domains] Alpha and beta (a+b) Tautomerase/MIF
1otff-3 [seq. related domains] Alpha and beta (a+b) Tautomerase/MIF
1mifc-2 [seq. related domains] undefined undefined
1dapb-2 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

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