3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 3.507

Ascend tree (bring in more domains)

Classes% of representative set
undefined 25.00
All beta 75.00
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 25.00 0.47
All beta
Elongation factor Tu (EF-Tu), the C-terminal domain from 3Dee 8.33 0.45
Pyruvate kinase beta-barrel domain from SCOP 16.67 0.89
Reductase/elongation factor common domain from 3Dee 50.00 2.68

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1a3wb-3 [seq. related domains] All beta Pyruvate kinase beta-barrel domain
1pyk-2 [seq. related domains] All beta Pyruvate kinase beta-barrel domain
1fdr-1 [seq. related domains] All beta Reductase/elongation factor common domain
1ndh-1 [seq. related domains] All beta Reductase/elongation factor common domain
2pia-1 [seq. related domains] All beta Reductase/elongation factor common domain
1quf-1 [seq. related domains] All beta Reductase/elongation factor common domain
1skyb-1 [seq. related domains] undefined undefined
1aw8e-1 [seq. related domains] undefined undefined
1skye-1 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1aipf-3 [seq. related domains] All beta Elongation factor Tu (EF-Tu), the C-terminal domain
1aipf-1 [seq. related domains] All beta Reductase/elongation factor common domain
1efga-2 [seq. related domains] All beta Reductase/elongation factor common domain

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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