3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 2.266

Ascend tree (bring in more domains)

Classes% of representative set
undefined 30.77
All beta 69.23
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 30.77 0.63
All beta
Elongation factor Tu (EF-Tu), the C-terminal domain from 3Dee 7.69 0.45
Pyruvate kinase beta-barrel domain from SCOP 15.38 0.89
Reductase/elongation factor common domain from 3Dee 46.15 2.68

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1sftb-1 [seq. related domains] undefined undefined

Cluster 1

Descend tree into cluster 1

1aipf-3 [seq. related domains] All beta Elongation factor Tu (EF-Tu), the C-terminal domain
1pyk-2 [seq. related domains] All beta Pyruvate kinase beta-barrel domain
1a3wb-3 [seq. related domains] All beta Pyruvate kinase beta-barrel domain
1fdr-1 [seq. related domains] All beta Reductase/elongation factor common domain
1aipf-1 [seq. related domains] All beta Reductase/elongation factor common domain
1ndh-1 [seq. related domains] All beta Reductase/elongation factor common domain
2pia-1 [seq. related domains] All beta Reductase/elongation factor common domain
1efga-2 [seq. related domains] All beta Reductase/elongation factor common domain
1quf-1 [seq. related domains] All beta Reductase/elongation factor common domain
1skye-1 [seq. related domains] undefined undefined
1aw8e-1 [seq. related domains] undefined undefined
1skyb-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

3dee@compbio.dundee.ac.uk