3 Dee - Database of Protein Domain Definitions

The current cluster is formed at a score of 2.038

Ascend tree (bring in more domains)

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• Classes

• All beta folds
• undefined folds

• Cluster 1
• Cluster 2

Breakdown into folds	% of cluster	% of class
undefined
undefined from 3Dee	41.18	1.10
All beta
Barwin-like endoglucanases from 3Dee	5.88	0.45
Elongation factor Tu (EF-Tu), the C-terminal domain from 3Dee	5.88	0.45
Pyruvate kinase beta-barrel domain from SCOP	11.76	0.89
Reductase/elongation factor common domain from 3Dee	35.29	2.68

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1aipf-3	[seq. related domains]	All beta	Elongation factor Tu (EF-Tu), the C-terminal domain
1a3wb-3	[seq. related domains]	All beta	Pyruvate kinase beta-barrel domain
1pyk-2	[seq. related domains]	All beta	Pyruvate kinase beta-barrel domain
1aipf-1	[seq. related domains]	All beta	Reductase/elongation factor common domain
1ndh-1	[seq. related domains]	All beta	Reductase/elongation factor common domain
2pia-1	[seq. related domains]	All beta	Reductase/elongation factor common domain
1efga-2	[seq. related domains]	All beta	Reductase/elongation factor common domain
1quf-1	[seq. related domains]	All beta	Reductase/elongation factor common domain
1fdr-1	[seq. related domains]	All beta	Reductase/elongation factor common domain
1aw8e-1	[seq. related domains]	undefined	undefined
1sftb-1	[seq. related domains]	undefined	undefined
1skye-1	[seq. related domains]	undefined	undefined
1skyb-1	[seq. related domains]	undefined	undefined

Cluster 2

Descend tree into cluster 2

1bw4-1	[seq. related domains]	All beta	Barwin-like endoglucanases
1fdo-4	[seq. related domains]	undefined	undefined
4eng-1	[seq. related domains]	undefined	undefined
4dmr-4	[seq. related domains]	undefined	undefined

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