3 Dee - Database of Protein Domain Definitions


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The current cluster is formed at a score of 1.233

Ascend tree (bring in more domains)

Classes% of representative set
undefined 36.36
Alpha and beta (a+b) 63.64
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 36.36 0.63
Alpha and beta (a+b)
Glutamine synthetase smaller domain from 3Dee 9.09 0.52
Nucleoside triphosphate pyrophosphorylase (MutT) from SCOP 9.09 0.52
beta-Grasp from 3Dee 45.45 2.59

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1se4-1 [seq. related domains] Alpha and beta (a+b) beta-Grasp
1aarb-1 [seq. related domains] Alpha and beta (a+b) beta-Grasp
2tssc-1 [seq. related domains] Alpha and beta (a+b) beta-Grasp
2cjo-1 [seq. related domains] Alpha and beta (a+b) beta-Grasp
1put-1 [seq. related domains] Alpha and beta (a+b) beta-Grasp
1rfa-1 [seq. related domains] undefined undefined
1acc-3 [seq. related domains] undefined undefined
2rgf-1 [seq. related domains] undefined undefined
2sak-1 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1lgr-1 [seq. related domains] Alpha and beta (a+b) Glutamine synthetase smaller domain
1tum-1 [seq. related domains] Alpha and beta (a+b) Nucleoside triphosphate pyrophosphorylase (MutT)

Enter PDB code - optionally suffixing the code with the chain id.


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