3 Dee - Database of Protein Domain Definitions


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The current cluster is formed at a score of 1.367

Ascend tree (bring in more domains)

Classes% of representative set
undefined 18.18
Small proteins 9.09
Alpha and beta (a+b) 72.73
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 18.18 0.31
Small proteins
Ada DNA repair protein, N-terminal domain (N-Ada 10) from SCOP 9.09 0.87
Alpha and beta (a+b)
ATP-grasp sub-domain II from 3Dee 36.36 2.07
CI-2 family of serine protease inhibitors from SCOP 9.09 0.52
beta-Grasp from 3Dee 27.27 1.55

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1adn-1 [seq. related domains] Small proteins Ada DNA repair protein, N-terminal domain (N-Ada 10)

Cluster 1

Descend tree into cluster 1

1bncb-3 [seq. related domains] Alpha and beta (a+b) ATP-grasp sub-domain II
1scue-2 [seq. related domains] Alpha and beta (a+b) ATP-grasp sub-domain II
1iow-3 [seq. related domains] Alpha and beta (a+b) ATP-grasp sub-domain II
1gsh-3 [seq. related domains] Alpha and beta (a+b) ATP-grasp sub-domain II
1cirb-1 [seq. related domains] Alpha and beta (a+b) CI-2 family of serine protease inhibitors
1igca-1 [seq. related domains] Alpha and beta (a+b) beta-Grasp
2ptl-1 [seq. related domains] Alpha and beta (a+b) beta-Grasp
1tif-1 [seq. related domains] Alpha and beta (a+b) beta-Grasp
1an7b-2 [seq. related domains] undefined undefined
2glia-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.


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