3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 0.480

Ascend tree (bring in more domains)

Classes% of representative set
undefined 37.50
Small proteins 37.50
All beta 25.00
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 37.50 0.47
Small proteins
Cystine-knot cytokines from SCOP 37.50 2.61
All beta
Acyl-CoA dehydrogenase (flavoprotein), middle domain, barrel like from 3Dee 12.50 0.45
OB-fold from SCOP 12.50 0.45

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1eged-2 [seq. related domains] All beta Acyl-CoA dehydrogenase (flavoprotein), middle domain, barrel like
1rip-1 [seq. related domains] All beta OB-fold
1div-2 [seq. related domains] undefined undefined
1occo-2 [seq. related domains] undefined undefined
1lml-4 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1vpfd-1 [seq. related domains] Small proteins Cystine-knot cytokines
1sgfy-1 [seq. related domains] Small proteins Cystine-knot cytokines
1bmp-1 [seq. related domains] Small proteins Cystine-knot cytokines

Enter PDB code - optionally suffixing the code with the chain id.

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