3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 0.282

Ascend tree (bring in more domains)

Classes% of representative set
undefined 44.44
Small proteins 33.33
All beta 22.22
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 44.44 0.63
Small proteins
Cystine-knot cytokines from SCOP 33.33 2.61
All beta
Acyl-CoA dehydrogenase (flavoprotein), middle domain, barrel like from 3Dee 11.11 0.45
OB-fold from SCOP 11.11 0.45

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1lml-3 [seq. related domains] undefined undefined

Cluster 1

Descend tree into cluster 1

1eged-2 [seq. related domains] All beta Acyl-CoA dehydrogenase (flavoprotein), middle domain, barrel like
1vpfd-1 [seq. related domains] Small proteins Cystine-knot cytokines
1sgfy-1 [seq. related domains] Small proteins Cystine-knot cytokines
1bmp-1 [seq. related domains] Small proteins Cystine-knot cytokines
1rip-1 [seq. related domains] All beta OB-fold
1div-2 [seq. related domains] undefined undefined
1lml-4 [seq. related domains] undefined undefined
1occo-2 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

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