3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 0.195

Ascend tree (bring in more domains)

Classes% of representative set
undefined 54.55
Alpha and beta (a/b) 18.18
Alpha and beta (a+b) 18.18
All beta 9.09
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 54.55 0.94
Alpha and beta (a/b)
CoA-dependent acetyltransferases from 3Dee 18.18 0.73
Alpha and beta (a+b)
Class II aaRS and biotin synthetases from SCOP 9.09 0.52
TBP-like from SCOP 9.09 0.52
All beta
Supersandwich from SCOP 9.09 0.45

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1bib-2 [seq. related domains] Alpha and beta (a+b) Class II aaRS and biotin synthetases
1bgmp-6 [seq. related domains] All beta Supersandwich
1lxtb-4 [seq. related domains] Alpha and beta (a+b) TBP-like
1bp1-1 [seq. related domains] undefined undefined
1bp1-2 [seq. related domains] undefined undefined
1ap8-1 [seq. related domains] undefined undefined
1btv-1 [seq. related domains] undefined undefined
1azsb-1 [seq. related domains] undefined undefined
1avpa-1 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1qca-1 [seq. related domains] Alpha and beta (a/b) CoA-dependent acetyltransferases
1dpd-1 [seq. related domains] Alpha and beta (a/b) CoA-dependent acetyltransferases

Enter PDB code - optionally suffixing the code with the chain id.

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