Uses of Interface
compbio.data.msa.Metadata

Packages that use Metadata

Package	Description
compbio.data.msa	Web Service interfaces for JAva Bioinformatics Analysis Web Services.
compbio.ws.client	A command line client and web services testing client for JAva Bioinformatics Analysis Web Services.
compbio.ws.server

Uses of Metadata in compbio.data.msa

Subinterfaces of Metadata in compbio.data.msa

Modifier and Type	Interface and Description
interface	MsaWS<T> Multiple Sequence Alignment (MSA) Web Services Interface
interface	SequenceAnnotation<T> Interface for tools that results to one or more annotation to sequence(s) Single, multiple sequences their groups or alignments can be annotated

Uses of Metadata in compbio.ws.client

Methods in compbio.ws.client with parameters of type Metadata

Modifier and Type	Method and Description
(package private) static <T> java.util.List<Limit<T>>	MetadataHelper.getLimits(Metadata<T> msaws) Returns a list of limits supported by web service Each limit correspond to a particular preset.
(package private) static <T> java.util.List<Option<T>>	MetadataHelper.getParametersList(Metadata<T> msaws) Returns a list of options supported by web service
(package private) static <T> java.util.List<Option<T>>	MetadataHelper.getParametersList(Metadata<T> msaws, java.lang.String host) Returns a list of options supported by web service
(package private) static <T> Preset<T>	MetadataHelper.getPreset(Metadata<T> msaws, java.lang.String presetName) Returns Preset by its name
(package private) static <T> PresetManager<T>	MetadataHelper.getPresetList(Metadata<T> msaws) Returns an objects from which the list of presets supported by web service can be obtained
private <T> void	WSTester.testMetadata(Metadata<T> msaws)

Uses of Metadata in compbio.ws.server

Classes in compbio.ws.server that implement Metadata

Modifier and Type	Class and Description
class	AAConWS
class	ClustalOWS
class	ClustalWS
class	DisemblWS
class	GlobPlotWS
class	GLprobsWS
class	IUPredWS
class	JronnWS
class	MafftWS
class	MSAprobsWS
class	MuscleWS
class	ProbconsWS
class	RNAalifoldWS
class	TcoffeeWS