Uses of Interface
compbio.data.msa.MsaWS

Packages that use MsaWS

Package	Description
compbio.ws.client	A command line client and web services testing client for JAva Bioinformatics Analysis Web Services.
compbio.ws.server

Uses of MsaWS in compbio.ws.client

Methods in compbio.ws.client with parameters of type MsaWS

Modifier and Type	Method and Description
(package private) static <T> Alignment	Jws2Client.align(java.io.File file, MsaWS<T> msaws, Preset<T> preset, java.util.List<Option<T>> customOptions) Align sequences from the file using MsaWS
private <T> boolean	WSTester.presetAlign(MsaWS<T> msaws, java.util.List<Preset<T>> presets) Calls alignment with preset
private <T> boolean	WSTester.testDefaultAlignment(MsaWS<T> msaws, Services service) Align using default settings
private <T> boolean	WSTester.testMsaWS(MsaWS<T> msaws, Services service)

Uses of MsaWS in compbio.ws.server

Classes in compbio.ws.server that implement MsaWS

Modifier and Type	Class and Description
class	ClustalOWS
class	ClustalWS
class	GLprobsWS
class	MafftWS
class	MSAprobsWS
class	MuscleWS
class	ProbconsWS
class	TcoffeeWS