compbio.engine.client

Class EnvVariableProcessor

java.lang.Object

compbio.engine.client.EnvVariableProcessor

public class EnvVariableProcessor
extends java.lang.Object

Field Summary

Fields

Modifier and Type	Field and Description
private static java.lang.String	fasta4mafft
private static java.lang.String	iupred_path
private static org.apache.log4j.Logger	log
private static java.lang.String	mafft_binaries
private static java.lang.String	NEXT_ENV_PROPERTY_DELIMITER
static java.lang.String	PATH Special variable keys Absolute path(s) will be merged with the content of the system PATH variable
private static java.lang.String	PROP_NAME_VALUE_SEPARATOR

Constructor Summary

Constructors

Constructor and Description
EnvVariableProcessor()

Method Summary

Modifier and Type	Method and Description
(package private) static boolean	containsMultipleVariables(java.lang.String property)
(package private) static java.lang.String[]	getEnvVariableList(java.lang.String property)
(package private) static java.lang.String	getEnvVariableName(java.lang.String property)
static java.util.Map<java.lang.String,java.lang.String>	getEnvVariables(java.lang.String property, java.lang.Class<?> clazz)
(package private) static java.lang.String	getEnvVariableValue(java.lang.String property)
(package private) static boolean	isValidEnvVariableProperty(java.lang.String property)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

PATH

public static final java.lang.String PATH

Special variable keys Absolute path(s) will be merged with the content of the system PATH variable

See Also:

Constant Field Values

log

private static org.apache.log4j.Logger log

PROP_NAME_VALUE_SEPARATOR

private static final java.lang.String PROP_NAME_VALUE_SEPARATOR

See Also:

Constant Field Values

NEXT_ENV_PROPERTY_DELIMITER

private static final java.lang.String NEXT_ENV_PROPERTY_DELIMITER

See Also:

Constant Field Values

mafft_binaries

private static final java.lang.String mafft_binaries

See Also:

Constant Field Values

fasta4mafft

private static final java.lang.String fasta4mafft

See Also:

Constant Field Values

iupred_path

private static final java.lang.String iupred_path

See Also:

Constant Field Values

Constructor Detail

EnvVariableProcessor

public EnvVariableProcessor()

Method Detail

containsMultipleVariables

static boolean containsMultipleVariables(java.lang.String property)

getEnvVariableList

static java.lang.String[] getEnvVariableList(java.lang.String property)

getEnvVariableName

static java.lang.String getEnvVariableName(java.lang.String property)

getEnvVariableValue

static java.lang.String getEnvVariableValue(java.lang.String property)

isValidEnvVariableProperty

static boolean isValidEnvVariableProperty(java.lang.String property)

getEnvVariables

public static java.util.Map<java.lang.String,java.lang.String> getEnvVariables(java.lang.String property,
                                                                               java.lang.Class<?> clazz)