compbio.engine.client

Class RunConfiguration

java.lang.Object

compbio.engine.client.RunConfiguration

public class RunConfiguration
extends java.lang.Object

Value class for persisting ConfExecutable instances

Author:

pvtroshin

Field Summary

Fields

Modifier and Type	Field and Description
private java.lang.String	error Input option
private java.lang.String	input Input
private static org.apache.log4j.Logger	log
private java.lang.String	output Output
private CommandBuilder<?>	parameters Parameters
static java.lang.String	rconfigFile
(package private) java.lang.String	runnerClassName Runner class name
(package private) java.lang.String	taskId Task ID (is a part of workDirectory but extracting it from there could be tricky)
(package private) java.lang.String	workDirectory Working directory

Constructor Summary

Constructors

Constructor and Description
RunConfiguration()
RunConfiguration(ConfExecutable<?> cexec)

Method Summary

Modifier and Type	Method and Description
boolean	equals(java.lang.Object obj)
java.lang.String	getError()
java.lang.String	getInput()
java.lang.String	getOutput()
CommandBuilder<?>	getParameters()
java.lang.String	getRunnerClassName()
int	hashCode()
static RunConfiguration	load(java.io.InputStream input)
void	setError(java.lang.String error)
void	setInput(java.lang.String input)
void	setOutput(java.lang.String output)
void	setParameters(CommandBuilder<?> parameters)
private boolean	strEquals(java.lang.String value, java.lang.String other)
java.lang.String	toString()
static boolean	write(RunConfiguration rconf)

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

log

private static org.apache.log4j.Logger log

rconfigFile

public static final java.lang.String rconfigFile

See Also:

Constant Field Values

taskId

java.lang.String taskId

Task ID (is a part of workDirectory but extracting it from there could be tricky)

workDirectory

java.lang.String workDirectory

Working directory

parameters

private CommandBuilder<?> parameters

Parameters

error

private java.lang.String error

Input option

output

private java.lang.String output

Output

input

private java.lang.String input

Input

runnerClassName

java.lang.String runnerClassName

Runner class name

Constructor Detail

RunConfiguration

public RunConfiguration()

RunConfiguration

public RunConfiguration(ConfExecutable<?> cexec)

Method Detail

write

public static boolean write(RunConfiguration rconf)
                     throws java.io.IOException

Throws:

java.io.IOException

load

public static RunConfiguration load(java.io.InputStream input)
                             throws java.io.IOException

Throws:

java.io.IOException

setOutput

public void setOutput(java.lang.String output)

getParameters

public CommandBuilder<?> getParameters()

setParameters

public void setParameters(CommandBuilder<?> parameters)

getOutput

public java.lang.String getOutput()

setError

public void setError(java.lang.String error)

getError

public java.lang.String getError()

getInput

public java.lang.String getInput()

setInput

public void setInput(java.lang.String input)

getRunnerClassName

public java.lang.String getRunnerClassName()

equals

public boolean equals(java.lang.Object obj)

Overrides:

equals in class java.lang.Object

strEquals

private boolean strEquals(java.lang.String value,
                          java.lang.String other)

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object