compbio.engine.cluster.drmaa

Class StatisticManager

java.lang.Object

compbio.engine.cluster.drmaa.StatisticManager

public class StatisticManager
extends java.lang.Object

Field Summary

Fields

Modifier and Type	Field and Description
(package private) java.lang.String	acct_cpu
(package private) java.lang.String	acct_io
(package private) java.lang.String	acct_iow
(package private) java.lang.String	acct_maxvmem
(package private) java.lang.String	acct_mem
(package private) java.lang.String	cpu
(package private) java.lang.String	end_time
(package private) java.lang.String	exit_status
(package private) java.lang.String	io
(package private) java.lang.String	iow
(package private) org.ggf.drmaa.JobInfo	jobinfo
(package private) java.lang.String	maxvmem
private static java.lang.String	newLine
(package private) java.lang.String	priority
(package private) java.lang.String	ru_stime
(package private) java.lang.String	ru_utime
(package private) java.lang.String	ru_wallclock
(package private) java.lang.String	signal see man 5 accounting on sun grid engine installed workstation see also man 2 getrusage
(package private) java.lang.String	start_time
(package private) java.lang.String	submission_time
private java.util.Map<java.lang.String,java.lang.String>	usage
(package private) java.lang.String	vmem

Constructor Summary

Constructors

Constructor and Description
StatisticManager(org.ggf.drmaa.JobInfo status)

Method Summary

Modifier and Type	Method and Description
(package private) java.lang.String	formatTime(java.lang.String time) Convert grid engine time format End time: 1250701672.0000 to a readable time representation as defined in Util.dataf
java.lang.String	getAllStats()
java.lang.String	getCalculationTime()
java.lang.String	getCPUTimeStat()
java.lang.String	getCPUUsageTime()
java.lang.String	getDataTransfered()
java.lang.String	getEndTime()
java.lang.String	getExecutionStat()
java.lang.String	getExitStatus()
java.lang.String	getIOWait()
java.lang.String	getJobId()
java.lang.String	getJobPriority()
java.lang.String	getMaxVMem()
java.lang.String	getMemoryStat()
java.util.Map<java.lang.String,java.lang.String>	getRawUsage()
java.lang.String	getStartTime()
java.lang.String	getSubmissionTime()
java.lang.String	getTimeStat()
java.lang.String	getUsedSysTime()
java.lang.String	getUsedUserTime()
java.lang.String	getVMem()
boolean	hasDump()
boolean	hasExited()
boolean	hasSignaled()
java.lang.String	termSignal()
java.lang.String	toString()
boolean	wasAborted()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

usage

private final java.util.Map<java.lang.String,java.lang.String> usage

jobinfo

final org.ggf.drmaa.JobInfo jobinfo

newLine

private static java.lang.String newLine

signal

java.lang.String signal

see man 5 accounting on sun grid engine installed workstation see also man 2 getrusage

submission_time

java.lang.String submission_time

vmem

java.lang.String vmem

maxvmem

java.lang.String maxvmem

ru_stime

java.lang.String ru_stime

ru_utime

java.lang.String ru_utime

ru_wallclock

java.lang.String ru_wallclock

end_time

java.lang.String end_time

start_time

java.lang.String start_time

iow

java.lang.String iow

cpu

java.lang.String cpu

io

java.lang.String io

priority

java.lang.String priority

exit_status

java.lang.String exit_status

acct_cpu

java.lang.String acct_cpu

acct_mem

java.lang.String acct_mem

acct_iow

java.lang.String acct_iow

acct_io

java.lang.String acct_io

acct_maxvmem

java.lang.String acct_maxvmem

Constructor Detail

StatisticManager

public StatisticManager(org.ggf.drmaa.JobInfo status)
                 throws org.ggf.drmaa.DrmaaException

Throws:

org.ggf.drmaa.DrmaaException

Method Detail

getJobId

public java.lang.String getJobId()
                          throws org.ggf.drmaa.DrmaaException

Throws:

org.ggf.drmaa.DrmaaException

hasExited

public boolean hasExited()
                  throws org.ggf.drmaa.DrmaaException

Throws:

org.ggf.drmaa.DrmaaException

hasSignaled

public boolean hasSignaled()
                    throws org.ggf.drmaa.DrmaaException

Throws:

org.ggf.drmaa.DrmaaException

hasDump

public boolean hasDump()
                throws org.ggf.drmaa.DrmaaException

Throws:

org.ggf.drmaa.DrmaaException

termSignal

public java.lang.String termSignal()
                            throws org.ggf.drmaa.DrmaaException

Throws:

org.ggf.drmaa.DrmaaException

wasAborted

public boolean wasAborted()
                   throws org.ggf.drmaa.DrmaaException

Throws:

org.ggf.drmaa.DrmaaException

getSubmissionTime

public java.lang.String getSubmissionTime()

getVMem

public java.lang.String getVMem()

getMaxVMem

public java.lang.String getMaxVMem()

getUsedSysTime

public java.lang.String getUsedSysTime()

getUsedUserTime

public java.lang.String getUsedUserTime()

getCalculationTime

public java.lang.String getCalculationTime()

getEndTime

public java.lang.String getEndTime()

getStartTime

public java.lang.String getStartTime()

getIOWait

public java.lang.String getIOWait()

getCPUUsageTime

public java.lang.String getCPUUsageTime()

getDataTransfered

public java.lang.String getDataTransfered()

getJobPriority

public java.lang.String getJobPriority()

getExitStatus

public java.lang.String getExitStatus()

getAllStats

public java.lang.String getAllStats()
                             throws org.ggf.drmaa.DrmaaException

Throws:

org.ggf.drmaa.DrmaaException

getExecutionStat

public java.lang.String getExecutionStat()
                                  throws org.ggf.drmaa.DrmaaException

Throws:

org.ggf.drmaa.DrmaaException

getMemoryStat

public java.lang.String getMemoryStat()

getCPUTimeStat

public java.lang.String getCPUTimeStat()

getTimeStat

public java.lang.String getTimeStat()

getRawUsage

public java.util.Map<java.lang.String,java.lang.String> getRawUsage()

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

formatTime

java.lang.String formatTime(java.lang.String time)

Convert grid engine time format End time: 1250701672.0000 to a readable time representation as defined in Util.dataf