compbio.engine.conf

Class RunnerConfigMarshaller<T>

java.lang.Object

compbio.engine.conf.RunnerConfigMarshaller<T>

public class RunnerConfigMarshaller<T>
extends java.lang.Object

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
(package private) static class	RunnerConfigMarshaller.MySchemaOutputResolver

Field Summary

Fields

Modifier and Type	Field and Description
private javax.xml.bind.JAXBContext	ctx
private static org.apache.log4j.Logger	log

Constructor Summary

Constructors

Constructor and Description
RunnerConfigMarshaller(java.lang.Class<?> rootClass)
RunnerConfigMarshaller(java.lang.Class<?> rootClass, java.lang.Class<?>... classes)

Method Summary

Modifier and Type	Method and Description
(package private) void	generateSchema(java.lang.String directoryForSchema, java.lang.String schemaName)
static javax.xml.validation.Schema	getSchema(java.lang.String schemafile)
static javax.xml.validation.Validator	getValidator(javax.xml.validation.Schema schema)
static javax.xml.validation.Validator	getValidator(java.lang.String schemafile)
<V> V	read(java.io.InputStream instream, java.lang.Class<V> resultElemType)
<V> V	read(java.io.InputStream instream, java.lang.Class<V> resultElemType, java.lang.Class<?>... classes)
<V> V	readAndValidate(java.io.InputStream document, java.lang.Class<V> resultElemType)
static boolean	validate(javax.xml.validation.Validator validator, java.lang.String document)
void	write(java.lang.Object xmlRootElement, java.io.OutputStream out)
void	writeAndValidate(java.lang.Object xmlRootElement, java.lang.String schemafile, java.io.OutputStream out)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

log

private static final org.apache.log4j.Logger log

ctx

private final javax.xml.bind.JAXBContext ctx

Constructor Detail

RunnerConfigMarshaller

public RunnerConfigMarshaller(java.lang.Class<?> rootClass)
                       throws javax.xml.bind.JAXBException

Throws:

javax.xml.bind.JAXBException

RunnerConfigMarshaller

public RunnerConfigMarshaller(java.lang.Class<?> rootClass,
                              java.lang.Class<?>... classes)
                       throws javax.xml.bind.JAXBException

Throws:

javax.xml.bind.JAXBException

Method Detail

write

public void write(java.lang.Object xmlRootElement,
                  java.io.OutputStream out)
           throws javax.xml.bind.JAXBException,
                  java.io.IOException

Throws:

javax.xml.bind.JAXBException

java.io.IOException

writeAndValidate

public void writeAndValidate(java.lang.Object xmlRootElement,
                             java.lang.String schemafile,
                             java.io.OutputStream out)
                      throws javax.xml.bind.JAXBException,
                             java.io.IOException,
                             org.xml.sax.SAXException

Throws:

javax.xml.bind.JAXBException

java.io.IOException

org.xml.sax.SAXException

generateSchema

void generateSchema(java.lang.String directoryForSchema,
                    java.lang.String schemaName)
             throws javax.xml.bind.JAXBException,
                    java.io.IOException

Throws:

javax.xml.bind.JAXBException

java.io.IOException

getSchema

public static javax.xml.validation.Schema getSchema(java.lang.String schemafile)
                                             throws org.xml.sax.SAXException

Throws:

org.xml.sax.SAXException

getValidator

public static javax.xml.validation.Validator getValidator(java.lang.String schemafile)
                                                   throws org.xml.sax.SAXException

Returns:

validator instance

Throws:

org.xml.sax.SAXException

getValidator

public static javax.xml.validation.Validator getValidator(javax.xml.validation.Schema schema)
                                                   throws org.xml.sax.SAXException

Throws:

org.xml.sax.SAXException

validate

public static boolean validate(javax.xml.validation.Validator validator,
                               java.lang.String document)
                        throws java.io.IOException,
                               org.xml.sax.SAXException

Throws:

java.io.IOException

org.xml.sax.SAXException

readAndValidate

public <V> V readAndValidate(java.io.InputStream document,
                             java.lang.Class<V> resultElemType)
                      throws javax.xml.bind.JAXBException,
                             java.io.IOException,
                             org.xml.sax.SAXException

Throws:

javax.xml.bind.JAXBException

java.io.IOException

org.xml.sax.SAXException

read

public <V> V read(java.io.InputStream instream,
                  java.lang.Class<V> resultElemType)
           throws javax.xml.bind.JAXBException

Throws:

javax.xml.bind.JAXBException

read

public <V> V read(java.io.InputStream instream,
                  java.lang.Class<V> resultElemType,
                  java.lang.Class<?>... classes)
           throws javax.xml.bind.JAXBException

Throws:

javax.xml.bind.JAXBException