[Dundee Uni] [Jpred]

The Barton Group

A method for protein secondary structure prediction

Results from Predictions

Q3 Values for each sequence with DSSP as the definition model

Those sequences highlighted in RED have Q3's of below 60%

Name PHD DSC PRED MUL NNSSP Zpred CONS Quality Length Class Fold
1aozb-1-AS 80.77 70.77 70.77 65.38 75.38 69.23 78.46 1.54 130.00 All beta Cupredoxins
1atpi-1-DOMAK 85.00 35.00 70.00 70.00 90.00 35.00 85.00 5.00 20.00 Peptides Protein kinases (PK) Inhibitor
1ayab-1-GJB 82.18 77.23 81.19 71.29 84.16 76.24 80.20 0.00 101.00 Alpha and beta (a+b) SH2-like
1bsdb-1-DOMAK 74.77 43.93 73.83 57.01 69.16 66.36 71.03 1.87 107.00 Alpha and beta (a+b) Microbal ribonucleases
1coi-1-AS 96.55 96.55 93.10 93.10 86.21 86.21 96.55 0.00 29.00 Peptides Antifreeze polypeptide HPLC-6
1cthb-1-DOMAK 59.49 68.35 55.70 59.49 59.49 59.49 59.49 5.06 79.00 Small proteins Cytochrome c3
1ctm-2-DOMAK 80.00 66.67 60.00 63.33 61.67 38.33 70.00 6.67 60.00 All beta Barrel-sandwich hybrid
1ctn-1-AS.1 80.73 80.73 71.56 61.47 75.23 58.72 78.90 1.83 109.00 All beta Immunoglobulin-like beta-sandwich
1edmc-1-AUTO.1 97.44 87.18 87.18 84.62 87.18 87.18 89.74 0.00 39.00 Small proteins EGF-like module
1gln-3-AS 75.00 68.75 52.08 68.75 72.92 79.17 75.00 0.00 48.00 All alpha Anticodon-binding (C-terminal) domain of glutamyl-tRNA Domain I
1gp2a-1-AUTO.1 89.29 96.43 92.86 71.43 78.57 78.57 89.29 0.00 28.00 Peptides Mellitin
1grj-2-AS 70.13 59.74 64.94 61.04 66.23 41.56 67.53 0.00 77.00 Alpha and beta (a+b) FKBP-like
1hcgb-1-AS 80.39 70.59 72.55 72.55 68.63 66.67 72.55 0.00 51.00 Small proteins EGF-like module
1htrp-1-AS 67.44 60.47 60.47 58.14 60.47 58.14 65.12 6.98 43.00 Small proteins Acid protease presegment
1hup-1-AS.1 100.00 83.33 75.00 75.00 91.67 66.67 100.00 0.00 24.00 All alpha Oligomers of long helices
1ilk-2-AS 95.56 88.89 91.11 86.67 88.89 86.67 95.56 0.00 45.00 All alpha 4-helical cytokines fragment
1isub-1-DOMAK 61.29 58.06 66.13 58.06 62.90 54.84 59.68 1.61 62.00 Small proteins HIPIP (high potential iron protein)
1lpe-1-DOMAK 84.03 88.89 84.72 84.03 81.94 81.94 84.03 0.00 144.00 All alpha Four-helical up-and-down bundle
1mcti-1-AUTO.1 53.57 50.00 46.43 35.71 53.57 57.14 53.57 0.00 28.00 Small proteins Small inhibitors, toxins, lectins
1mdta-1-AS 73.80 70.05 60.43 56.68 67.38 51.87 71.66 1.07 187.00 Alpha and beta (a+b) ADP-ribosylation toxins
1ndh-2-AS 69.39 59.18 59.18 55.78 60.54 52.38 65.99 0.00 147.00 Alpha and beta (a/b) Ferredoxin reductase-like, C-terminal NADP-linked domain
1pga-1-DOMAK 75.00 66.07 48.21 58.93 67.86 55.36 71.43 3.57 56.00 Alpha and beta (a+b) beta-Grasp
1powb-4-DOMAK 77.27 90.91 77.27 61.36 68.18 40.91 77.27 0.00 44.00 All alpha Pyruvate oxidase and decarboxylase, C terminal domain
1reqc-1-AS 69.81 73.58 84.91 71.70 67.92 54.72 67.92 3.77 53.00 Unknown Unknown
1rpo-1-AUTO.1 96.72 95.08 96.72 95.08 98.36 88.52 96.72 0.00 61.00 All alpha ROP protein
1svb-2-AS 68.75 56.25 65.62 57.29 61.46 51.04 61.46 0.00 96.00 Unknown Unknown
1tabi-1-DOMAK 86.11 83.33 88.89 83.33 80.56 83.33 83.33 0.00 36.00 Small proteins Small inhibitors, toxins, lectins
1ubdc-1-AS 70.37 66.67 77.78 74.07 74.07 77.78 70.37 0.00 27.00 Small proteins Classic zinc finger
1wapv-1-AUTO.1 73.13 74.63 55.22 37.31 52.24 28.36 70.15 0.00 67.00 All beta Double-stranded beta-helix, jelly-roll domain
1wfbb-1-AUTO.1 97.30 94.59 89.19 78.38 94.59 94.59 94.59 0.00 37.00 Peptides Antifreeze polypeptide HPLC-6
2aaib-2-DOMAK 69.35 70.16 60.48 65.32 80.65 70.16 69.35 2.42 124.00 All beta beta-Trefoil
2erl-1-AUTO.1 45.00 32.50 45.00 47.50 57.50 45.00 45.00 17.50 40.00 Unknown Unknown
2mltb-1-GJB 80.77 38.46 42.31 19.23 84.62 30.77 76.92 0.00 26.00 Peptides Mellitin
3pmgb-2-AS 76.32 69.30 68.42 51.75 71.93 42.11 71.05 0.00 114.00 Alpha and beta (a/b) Phosphoglucomutase, first 3 domains
6rlxd-1-DOMAK 64.00 40.00 60.00 36.00 60.00 48.00 60.00 8.00 25.00 Small proteins Insulin-like
1nga-2-AS.1 78.42 73.16 73.68 70.53 74.21 62.63 76.84 2.63 190.00 Alpha and beta (a/b) Ribonuclease H-like motif
1gpmd-5-AS 78.09 68.54 67.42 65.17 73.03 63.48 75.84 5.06 178.00 Alpha and beta (a/b) ATP pyrophosphatases
1asw-1-AUTO.1 82.43 75.00 74.32 72.30 77.70 73.65 79.05 0.00 148.00 Alpha and beta (a/b) Ribonuclease H-like motif
1fuqb-1-AUTO.1 74.26 66.91 74.26 63.97 75.74 61.76 73.53 1.47 136.00 Unknown Unknown
1zymb-2-AUTO.1 87.50 79.69 80.47 82.03 85.16 71.88 85.16 0.00 128.00 Unknown Unknown
1cnsb-1-AUTO.1 67.90 64.20 62.55 55.14 61.73 54.73 65.84 4.53 243.00 Alpha and beta (a+b) Lysozyme-like
1mspb-1-AS 79.51 77.87 64.75 62.30 71.31 56.56 78.69 0.00 122.00 All beta Immunoglobulin-like beta-sandwich
1mai-1-JAC 70.59 50.42 51.26 60.50 63.03 63.03 60.50 20.17 119.00 Unknown Unknown
1dlc-1-AS.1 83.84 77.73 67.69 48.47 78.17 40.61 81.22 0.00 229.00 Membrane and cell surface proteins and peptides Toxins' membrane translocation domains
1dynb-1-AUTO.1 63.72 50.44 50.44 51.33 62.83 47.79 60.18 5.31 113.00 All beta PH domain-like
3mddb-2-AS 72.07 66.67 64.86 54.05 62.16 63.06 71.17 0.00 111.00 All beta Acyl-CoA dehydrogenase (flavoprotein), middle domain, barrel like
1vcab-2-AUTO.1 68.18 52.73 43.64 32.73 50.91 36.36 57.27 10.00 110.00 All beta Immunoglobulin-like beta-sandwich
1cewi-1-DOMAK 69.44 56.48 51.85 50.93 58.33 50.93 62.96 10.19 108.00 Alpha and beta (a+b) Cystatin-like
1ilk-1-AS 77.36 76.42 72.64 79.25 79.25 80.19 78.30 0.00 106.00 All alpha 4-helical cytokines Short chain
1sesa-2-AS 64.98 57.10 57.10 52.37 62.78 55.52 61.83 6.94 317.00 Alpha and beta (a+b) Class II aaRS and biotin synthetases
1hiws-1-AS 64.08 56.31 72.82 57.28 69.90 54.37 65.05 7.77 103.00 All alpha Retroviral matrix proteins
1irk-2-AS 76.47 69.61 73.04 70.59 75.49 61.76 77.45 0.98 204.00 Alpha and beta (a+b) Protein kinases (PK), catalytic core C terminal Domain
1cfb-1-AS 79.21 86.14 72.28 66.34 73.27 71.29 79.21 0.00 101.00 All beta Immunoglobulin-like beta-sandwich
1stfi-1-DOMAK 77.55 67.35 67.35 55.10 67.35 55.10 72.45 0.00 98.00 Alpha and beta (a+b) Cystatin-like
1thtb-1-AUTO.1 67.58 65.87 69.28 59.73 69.97 55.63 68.60 7.85 293.00 Alpha and beta (a/b) alpha/beta-Hydrolases
1nal4-1-AUTO.1 84.19 82.82 82.13 76.63 84.19 72.16 83.51 1.03 291.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
1ris-1-DOMAK 67.01 62.89 59.79 51.55 67.01 60.82 67.01 11.34 97.00 Alpha and beta (a+b) Ferredoxin-like
1tml-1-AS 83.92 77.27 79.72 70.63 81.47 60.49 82.52 0.70 286.00 Alpha and beta (a/b) Cellulases
2ebn-1-AS 81.40 76.14 77.89 70.18 78.25 60.35 79.30 2.11 285.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
1gep-2-AS 80.45 69.27 75.98 73.18 79.33 63.13 78.77 1.12 179.00 Unknown Unknown
1dpgb-1-AUTO.1 87.57 71.19 77.97 71.75 83.05 69.49 87.57 2.26 177.00 Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1tig-1-AUTO.1 78.41 61.36 62.50 57.95 70.45 53.41 72.73 4.55 88.00 Alpha and beta (a+b) IF3-like
1celb-1-AUTO.1 65.13 62.12 63.74 58.43 63.74 57.27 65.82 3.46 433.00 Unknown Unknown
2hpr-1-DOMAK 71.26 71.26 68.97 62.07 71.26 51.72 70.11 0.00 87.00 Alpha and beta (a+b) Histidine-containing phosphocarrier proteins (HPr)
1fuqb-2-AUTO.1 75.20 75.60 73.20 69.60 76.00 70.40 75.60 4.00 250.00 Unknown Unknown
1pht-1-AUTO.1 46.99 36.14 46.99 40.96 42.17 37.35 43.37 3.61 83.00 All beta SH3-like barrel
2spt-2-DOMAK 76.83 74.39 87.80 86.59 86.59 78.05 78.05 0.00 82.00 Small proteins Kringle modules
1mdta-3-AS 76.73 69.18 65.41 50.94 72.33 57.23 76.10 0.00 159.00 All beta Common fold of diphtheria toxin/transcription factors/cytochrome f
1onrb-1-AUTO.1 77.22 73.42 70.25 64.87 75.00 61.71 75.32 3.16 316.00 Unknown Unknown
1mns-2-AS 71.05 63.60 72.37 61.40 67.54 55.26 71.05 4.39 228.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
1nfp-1-AS 77.63 70.61 76.32 61.84 78.95 60.96 76.75 3.07 228.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
1latb-1-AUTO.1 72.97 70.27 72.97 47.30 70.27 47.30 68.92 0.00 74.00 Small proteins Glucocorticoid receptor-like (DNA-binding domain)
4fisb-1-DOMAK 84.93 80.82 93.15 87.67 93.15 69.86 84.93 0.00 73.00 All alpha FIS protein
1oacb-4-AS.1 69.95 70.19 58.92 58.69 60.09 58.22 69.01 0.47 426.00 All beta Supersandwich
1ctf-1-DOMAK 76.47 61.76 66.18 58.82 70.59 47.06 67.65 10.29 68.00 Alpha and beta (a+b) Ribosomal protein L7/12, C-terminal fragment
1rsy-1-AS 71.85 72.59 59.26 54.07 65.19 54.07 69.63 5.19 135.00 All beta Immunoglobulin-like beta-sandwich
1fuqb-3-AUTO.1 86.36 69.70 69.70 71.21 77.27 65.15 80.30 0.00 66.00 Unknown Unknown
1dik-2-AS.1 62.31 49.23 59.23 47.69 68.46 50.77 60.00 13.08 130.00 Alpha and beta (a+b) ATP-grasp sub-domain II
1dsbb-2-AUTO.1 79.69 78.12 50.00 68.75 78.12 71.88 79.69 1.56 64.00 All alpha Disulphide-bond formation facilitator (DSBA), insertion domain
2pgd-2-AUTO.1 79.45 74.70 75.49 58.50 76.28 56.13 79.84 0.40 253.00 All alpha 6-phosphogluconate & Acyl-CoA dehydrogenases, C-terminal domain
2nadb-2-AS.1 74.59 61.08 73.51 73.51 80.54 61.62 75.68 1.08 185.00 Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1qbb-2-AUTO.1 77.05 62.30 69.67 56.56 64.75 50.00 73.77 0.00 122.00 Unknown Unknown
3inkd-1-DOMAK 58.68 61.16 60.33 55.37 67.77 51.24 59.50 9.92 121.00 All alpha 4-helical cytokines
2pgd-1-AUTO.1 70.17 65.19 67.40 60.77 69.06 62.43 70.72 0.00 181.00 Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1dnpb-2-AUTO.1 68.89 67.22 65.00 55.56 72.78 55.00 70.00 1.67 180.00 Unknown Unknown
1esl-1-GJB 74.17 63.33 73.33 75.83 71.67 75.00 74.17 0.00 120.00 Alpha and beta (a+b) C-type lectin
1gp2g-2-AS 83.22 82.89 77.85 65.77 74.83 75.84 82.55 0.00 298.00 All beta 7-bladed beta-propeller
1bncb-4-AS 76.27 70.34 69.49 65.25 71.19 73.73 73.73 3.39 118.00 All beta Barrel-sandwich hybrid
1sftb-2-AS 69.57 66.09 69.57 66.96 74.35 63.48 68.26 9.13 230.00 Unknown Unknown
1seib-2-AUTO.1 66.67 64.91 59.65 64.91 56.14 66.67 66.67 0.00 57.00 Unknown Unknown
2bat-1-GJB 70.62 65.46 66.49 64.43 70.10 63.66 69.59 2.06 388.00 All beta 6-bladed beta-propeller
2gsq-2-AS 85.59 76.58 90.09 79.28 87.39 67.57 85.59 0.90 111.00 All alpha Glutathione S-transferases, C-terminal domain
821p-1-DOMAK 80.72 71.69 72.29 62.05 80.12 57.23 79.52 6.02 166.00 Alpha and beta (a/b) P-loop containing nucleotide triphosphate hydrolases
1isab-2-GJB 80.73 72.48 79.82 62.39 77.06 61.47 82.57 0.00 109.00 Alpha and beta (a+b) Fe,Mn superoxide dismutase (SOD), C-terminal domain
1tcba-1-AS 56.78 53.00 53.94 47.32 55.21 45.11 56.15 9.15 317.00 Alpha and beta (a/b) alpha/beta-Hydrolases
1hxn-1-AS 76.19 72.38 70.00 65.24 68.10 57.62 74.29 1.43 210.00 All beta 4-bladed beta-propeller
1pnt-1-AS 77.71 68.79 71.97 61.78 77.07 63.06 77.07 0.64 157.00 Alpha and beta (a/b) Phosphotyrosine protein phosphatases I
1chbe-1-DOMAK 73.79 66.02 65.05 43.69 63.11 51.46 68.93 13.59 103.00 All beta OB-fold
1dpgb-2-AUTO.1 72.73 63.31 63.96 65.91 66.56 59.42 69.81 1.30 308.00 Alpha and beta (a+b) Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
1kinb-1-AUTO.1 71.75 67.21 64.94 61.04 62.66 55.19 71.75 0.65 308.00 Unknown Unknown
3mddb-3-AS 84.42 83.12 77.92 77.92 83.77 74.68 86.36 2.60 154.00 All alpha Four-helical up-and-down bundle
1bncb-3-AS 64.71 54.90 68.63 58.82 68.63 45.10 62.75 5.88 51.00 Alpha and beta (a+b) ATP-grasp sub-domain II
2hft-1-AS 65.69 73.53 55.88 64.71 72.55 58.82 64.71 5.88 102.00 All beta Immunoglobulin-like beta-sandwich
1gky-2-AS 60.00 54.00 64.00 52.00 58.00 44.00 56.00 8.00 50.00 Alpha and beta (a+b) P-loop containing nucleotide triphosphate hydrolases, inserted domain in Guanylate Kinase
1krca-1-AUTO.1 78.00 70.00 75.00 66.00 79.00 73.00 78.00 2.00 100.00 Alpha and beta (a+b) Urease, gamma-subunit
1smpi-1-AS 69.00 56.00 52.00 44.00 56.00 38.00 70.00 0.00 100.00 All beta Streptavidin-like
1ncg-1-AUTO.2 76.77 80.81 59.60 57.58 76.77 57.58 77.78 0.00 99.00 All beta Immunoglobulin-like beta-sandwich
1gln-4-AS 81.63 75.51 70.41 68.37 83.67 69.39 76.53 3.06 98.00 All alpha Anticodon-binding (C-terminal) domain of glutamyl-tRNA Domain II
1hmy-2-AS 54.08 56.12 53.06 61.22 64.29 46.94 51.02 7.14 98.00 Alpha and beta (a/b) S-adenosyl-L-methionine-dependent methyltransferases Domain II
1vpt-1-JAC 74.91 68.73 68.04 63.23 72.16 55.33 74.91 2.75 291.00 Unknown Unknown
1dnpb-1-AUTO.1 85.47 69.90 76.12 69.55 82.70 65.40 82.70 2.77 289.00 Unknown Unknown
1clc-2-AS.1 79.92 77.41 77.41 71.13 77.82 67.36 80.33 0.84 239.00 All alpha Glycosyltransferases of the superhelical fold Domain I
3pmgb-1-AS 75.53 67.55 65.43 60.64 70.21 55.32 73.94 1.06 188.00 Alpha and beta (a/b) Phosphoglucomutase, first 3 domains
1cpcl-1-DOMAK 82.86 87.14 83.57 60.71 84.29 57.14 83.57 2.14 140.00 All alpha Globin-like
1bcx-1-DOMAK 82.70 77.84 62.70 55.14 71.89 64.86 81.08 1.08 185.00 All beta ConA-like lectins/glucanases
1powb-1-DOMAK 76.37 61.54 72.53 65.93 74.18 67.58 75.82 0.00 182.00 Alpha and beta (a/b) Thiamin-binding
1vcab-1-AUTO.1 78.65 74.16 52.81 58.43 74.16 59.55 78.65 0.00 89.00 All beta Immunoglobulin-like beta-sandwich
1mdta-2-AS 72.32 72.88 66.10 62.15 75.71 59.32 72.88 3.39 177.00 Membrane and cell surface proteins and peptides Toxins' membrane translocation domains
1han-1-AUTO.1 78.79 65.91 70.45 57.58 67.42 59.09 77.27 3.79 132.00 Alpha and beta (a+b) 2,3-Dihydroxybiphenyl dioxygenase (DHDB, BPHC enzyme)
1kuh-1-AS 67.42 50.00 59.85 53.03 59.85 54.55 66.67 9.85 132.00 Alpha and beta (a+b) Metzincins, catalytic (N-terminal) domain
1aazb-1-DOMAK 78.16 74.71 62.07 62.07 70.11 51.72 75.86 2.30 87.00 Alpha and beta (a/b) Thioredoxin-like
1pda-3-AS 79.31 68.97 70.11 64.37 75.86 74.71 79.31 2.30 87.00 Alpha and beta (a+b) dsRBD & PDA domains
1dkza-1-JAC 80.47 72.09 80.93 70.70 76.28 71.63 80.47 0.00 215.00 Unknown Unknown
1pdo-1-GJB 85.27 78.29 79.07 73.64 82.17 63.57 84.50 0.00 129.00 Unknown Unknown
1svb-1-AS 65.89 64.88 53.18 53.51 61.20 49.50 65.55 5.02 299.00 Unknown Unknown
1trb-2-AS 67.19 65.62 65.62 55.47 63.28 57.81 67.19 3.12 128.00 Alpha and beta (a/b) FAD (also NAD)-binding motif
1cei-1-GJB 82.35 78.82 75.29 80.00 84.71 75.29 83.53 3.53 85.00 Unknown Unknown
1vid-1-JAC 78.87 52.11 68.08 58.22 72.30 55.40 76.06 3.76 213.00 Unknown Unknown
1rie-1-GJB 77.17 75.59 66.14 57.48 71.65 51.18 79.53 0.00 127.00 Unknown Unknown
2sil-1-AS 71.92 70.08 72.44 61.42 69.03 67.98 72.18 1.84 381.00 All beta 6-bladed beta-propeller
1masb-1-AUTO.1 78.31 69.83 78.98 67.80 76.27 65.08 76.27 2.71 295.00 Unknown Unknown
1powb-2-DOMAK 73.37 57.99 77.51 72.78 85.21 58.58 75.15 3.55 169.00 Alpha and beta (a/b) Pyruvate oxidase and decarboxylase, middle domain
1cgu-3-GJB 75.00 66.67 59.52 58.33 69.05 61.90 69.05 0.00 84.00 All beta Immunoglobulin-like beta-sandwich
1isab-1-GJB 67.47 78.31 67.47 62.65 68.67 53.01 69.88 1.20 83.00 All alpha Long alpha-hairpin
1epbb-1-DOMAK 81.10 68.29 59.76 58.54 73.17 54.27 76.22 1.83 164.00 All beta Lipocalins
2npx-3-AS.1 65.85 48.78 68.29 63.41 68.29 56.10 62.60 10.57 123.00 Alpha and beta (a+b) FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2polb-1-AS 75.61 70.73 62.60 53.66 71.54 53.66 76.42 0.81 123.00 Alpha and beta (a+b) DNA clamp
1scud-1-AS 76.86 74.38 72.73 67.77 71.90 66.12 75.21 0.00 121.00 Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1chd-1-AS 79.80 67.17 70.71 63.64 69.70 57.07 77.27 2.02 198.00 Alpha and beta (a/b) CheB methylesterase domain (C-terminal residues 152-349)
1hjrd-1-AUTO.1 79.75 63.29 64.56 62.03 61.39 65.82 71.52 5.70 158.00 Alpha and beta (a/b) Ribonuclease H-like motif
1srja-1-DOMAK 78.81 73.73 49.15 47.46 62.71 62.71 72.03 1.69 118.00 All beta Streptavidin-like
1hvq-1-AUTO.1 67.40 59.71 59.71 57.88 64.47 52.01 67.03 0.00 273.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
3pmgb-3-AS 70.94 58.12 53.85 65.81 62.39 62.39 68.38 0.85 117.00 Alpha and beta (a/b) Phosphoglucomutase, first 3 domains
1din-1-AS 81.12 79.83 75.11 73.82 76.82 71.67 80.69 0.00 233.00 Unknown Unknown
1gln-2-AS 75.86 74.14 76.72 67.24 72.41 67.24 78.45 0.00 116.00 Alpha and beta (a/b) ATP pyrophosphatases inserted Domain I
1ghsb-1-GJB 70.59 70.26 62.75 56.21 70.92 55.88 71.24 4.90 306.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
1gog-1-AS.1 73.86 70.59 64.05 56.21 70.59 63.40 74.51 0.00 153.00 All beta Galactose-binding domain-like
1ktq-1-AUTO.1 73.20 66.01 66.01 65.36 75.16 65.36 75.16 5.23 153.00 Alpha and beta (a/b) Ribonuclease H-like motif
2rsla-1-GJB 72.17 64.35 72.17 67.83 76.52 58.26 73.04 0.00 115.00 Alpha and beta (a/b) gamma,delta Resolvase, large fragment
1lehb-3-AS 77.29 73.36 70.74 70.31 75.11 58.52 78.60 3.49 229.00 Unknown Unknown
1pnmb-2-AS 70.16 72.25 72.77 58.64 74.35 46.60 71.20 1.05 191.00 All alpha N-terminal nucleophile aminohydrolases (Ntn hydrolases) B chain Domain
1hyp-1-DOMAK 70.67 72.00 72.00 62.67 48.00 49.33 72.00 6.67 75.00 All alpha Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
2afnc-1-AUTO.1 75.84 71.81 63.76 61.07 77.18 59.06 77.18 2.68 149.00 All beta Cupredoxins
2tgi-1-DOMAK 51.79 47.32 52.68 51.79 51.79 49.11 50.89 5.36 112.00 Small proteins Cystine-knot cytokines
154l-1-AUTO.1 55.68 53.51 60.00 54.59 60.00 50.27 56.76 9.73 185.00 Alpha and beta (a+b) Lysozyme-like
1dih-2-AS 76.36 70.91 71.82 60.91 69.09 70.00 76.36 3.64 110.00 Alpha and beta (a+b) Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
2dln-3-AS 61.64 54.79 72.60 69.86 57.53 54.79 64.38 6.85 73.00 Alpha and beta (a+b) ATP-grasp sub-domain II
1cem-1-GJB 71.07 76.58 69.97 59.78 67.77 51.52 71.90 5.51 363.00 Unknown Unknown
1nol-1-AUTO.2 70.09 63.55 61.68 70.09 66.36 72.90 68.22 0.00 107.00 All alpha Hemocyanin, N-terminal domain
5sici-1-DOMAK 80.37 68.22 74.77 66.36 68.22 61.68 77.57 0.93 107.00 Alpha and beta (a+b) Subtilisin inhibitor
1aorb-1-AS 74.88 62.56 79.15 63.51 67.30 54.03 75.36 4.27 211.00 Alpha and beta (a+b) Aldehyde ferredoxin oxidoreductase, N-terminal domains
1rlr-2-JAC 67.49 63.69 69.96 68.06 71.48 63.50 68.44 2.28 526.00 Unknown Unknown
1kptb-1-AUTO.1 52.38 58.10 51.43 45.71 56.19 46.67 55.24 3.81 105.00 Alpha and beta (a+b) Virally encoded KP4 toxin
1mla-2-AS.1 68.57 60.00 60.00 55.71 62.86 51.43 67.14 10.00 70.00 Alpha and beta (a+b) Ferredoxin-like
1cpn-1-DOMAK 66.83 70.67 62.02 55.29 67.31 59.13 68.75 0.48 208.00 All beta ConA-like lectins/glucanases
1ecl-1-AS 64.03 58.99 67.63 58.99 66.91 52.52 64.75 2.88 139.00 Alpha and beta (a/b) Type I DNA topoisomerase Rossmann-fold like domain
1bovb-1-DOMAK 69.57 52.17 81.16 44.93 55.07 42.03 71.01 4.35 69.00 All beta OB-fold
1clc-1-AS.1 68.63 63.73 71.57 57.84 73.53 58.82 70.59 0.00 102.00 All beta Immunoglobulin-like beta-sandwich
1find-1-AUTO.1 78.68 83.82 77.94 72.06 91.18 80.15 81.62 3.68 136.00 Unknown Unknown
1pkyc-2-AUTO.1 66.18 58.82 79.41 75.00 73.53 54.41 66.18 2.94 68.00 All beta Pyruvate kinase beta-barrel domain
1ecpf-1-AUTO.1 75.95 68.35 69.20 63.71 75.95 61.60 72.57 4.22 237.00 Alpha and beta (a/b) Purine and uridine phosphorylases
1vhrb-2-AUTO.1 78.22 78.22 75.25 69.31 77.23 73.27 78.22 0.00 101.00 Unknown Unknown
1xvab-1-GJB 65.43 63.94 71.00 55.39 65.06 57.99 65.80 4.09 269.00 Unknown Unknown
1euu-2-JAC 79.00 78.00 75.00 62.00 72.00 62.00 76.00 0.00 100.00 All beta Immunoglobulin-like beta-sandwich
1oyc-1-AS 73.93 72.43 75.69 68.67 73.68 66.67 76.19 1.50 399.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
2cpo-1-AUTO.1 68.46 64.77 53.36 61.41 64.43 56.04 67.79 12.42 298.00 Unknown Unknown
1gcmc-1-AUTO.1 87.88 90.91 90.91 90.91 84.85 87.88 90.91 0.00 33.00 All alpha Oligomers of long helices
2trt-1-AUTO.1 86.87 82.83 81.82 78.79 84.85 71.72 88.38 1.52 198.00 Unknown Unknown
1lib-1-DOMAK 83.21 69.47 70.99 49.62 74.05 45.80 77.86 0.00 131.00 All beta Lipocalins
1ctu-2-AUTO.1 56.15 50.00 66.15 48.46 63.85 53.08 58.46 9.23 130.00 Alpha and beta (a/b) Cytidine deaminase
1tupc-1-AUTO.1 68.21 69.23 63.08 65.64 73.85 60.00 67.69 2.56 195.00 All beta Common fold of diphtheria toxin/transcription factors/cytochrome f
1gnd-2-JAC 67.01 71.13 62.89 62.89 63.92 57.73 69.07 5.15 97.00 Unknown Unknown
1tplb-3-AS 78.29 70.54 77.52 81.40 80.62 60.47 79.84 2.33 129.00 Alpha and beta (a/b) PLP-dependent transferases Domain III
1cgu-2-GJB 69.79 61.46 71.88 63.54 75.00 65.62 68.75 2.08 96.00 All beta alpha-Amylases, beta-sheet domain
1ptx-1-AS 56.25 54.69 51.56 54.69 42.19 60.94 56.25 0.00 64.00 Small proteins Small inhibitors, toxins, lectins
1vnc-1-JAC 67.71 66.15 63.72 61.81 64.58 56.94 68.58 4.69 576.00 Unknown Unknown
1chkb-2-AUTO.1 76.84 64.21 68.42 64.21 80.00 68.42 74.74 2.11 95.00 Unknown Unknown
1cyx-1-AUTO.1 76.58 72.15 72.78 60.76 64.56 64.56 76.58 0.00 158.00 All beta Cupredoxins
1cfr-1-GJB 65.02 60.07 53.71 51.59 63.25 44.17 65.37 6.01 283.00 Unknown Unknown
1dts-1-AUTO.1 78.64 63.18 79.09 75.91 77.73 70.45 80.00 0.00 220.00 Alpha and beta (a/b) P-loop containing nucleotide triphosphate hydrolases
3bcl-1-DOMAK 58.14 54.65 45.93 44.19 45.35 43.90 56.69 4.94 344.00 All beta Bacteriochlorophyl A protein
1gpc-1-AS 59.17 59.63 61.47 50.46 62.84 53.21 61.01 5.50 218.00 All beta OB-fold
1gal-3-AS 59.14 56.99 48.92 46.24 63.98 50.00 61.29 11.83 186.00 Alpha and beta (a+b) FAD-linked reductases, C-terminal domain
1knb-1-AS 73.66 70.97 79.03 75.81 79.03 68.28 76.34 0.00 186.00 All beta Adenovirus type 5 fiber protein, knob domain
1tcra-2-GJB 78.02 81.32 78.02 73.63 85.71 71.43 81.32 0.00 91.00 Unknown Unknown
1sra-1-AS 67.55 58.94 58.28 56.95 69.54 62.25 65.56 6.62 151.00 All alpha EF-hand
1regy-1-AUTO.1 64.17 65.83 68.33 62.50 61.67 49.17 65.83 7.50 120.00 Alpha and beta (a+b) Ferredoxin-like
3mddb-1-AS 70.83 75.00 72.50 60.83 72.50 61.67 74.17 5.00 120.00 All alpha Acyl-CoA dehydrogenase (flavoprotein), N-terminal domain
1trkb-1-AS 79.03 76.90 80.85 77.81 81.76 69.30 80.55 0.00 329.00 Alpha and beta (a/b) Thiamin-binding
1gog-2-AS.1 63.40 63.66 63.92 62.63 68.30 58.25 64.95 0.00 388.00 All beta 7-bladed beta-propeller
1comc-1-DOMAK 79.83 68.91 64.71 58.82 63.87 57.98 77.31 1.68 119.00 Alpha and beta (a+b) Chorismate mutase
1vjs-3-GJB 80.90 77.53 73.03 62.92 77.53 62.92 82.02 0.00 89.00 All beta alpha-Amylases, beta-sheet domain
2reb-2-DOMAK 64.41 47.46 59.32 59.32 74.58 67.80 64.41 3.39 59.00 Alpha and beta (a+b) Anti-LPS factor/recA domain
1ecl-4-AS 79.49 74.36 83.76 71.79 77.78 66.67 76.92 0.00 117.00 All alpha Winged DNA binding like
1rhgc-1-DOMAK 90.34 85.52 72.41 65.52 80.00 57.93 88.97 0.00 145.00 All alpha 4-helical cytokines
1ubdc-2-AS 62.07 75.86 79.31 68.97 48.28 55.17 65.52 0.00 29.00 Small proteins Classic zinc finger
1oacb-3-AS.1 75.65 67.83 70.43 62.61 69.57 58.26 75.65 2.61 115.00 Alpha and beta (a+b) Cystatin-like
1amg-2-AS 77.19 73.68 77.19 70.18 77.19 70.18 75.44 0.00 57.00 All beta alpha-Amylases, beta-sheet domain
1bncb-1-AS 75.44 59.65 79.82 71.93 82.46 60.53 77.19 3.51 114.00 Alpha and beta (a/b) Biotin carboxylase N-terminal domain-like
2asr-1-DOMAK 86.62 86.62 82.39 54.23 85.21 48.59 85.92 0.00 142.00 All alpha Four-helical up-and-down bundle
2hhmb-1-DOMAK 60.56 56.34 59.86 60.56 61.27 64.79 61.97 5.63 142.00 Alpha and beta (a+b) Sugar phosphatases alpha+beta N terminal domain
1fbab-1-DOMAK 80.56 76.11 78.33 69.44 80.28 65.28 80.56 2.50 360.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
1tie-1-DOMAK 78.31 76.51 78.92 66.27 79.52 63.86 80.12 0.00 166.00 All beta beta-Trefoil
1ctu-1-AUTO.1 59.76 57.93 60.98 51.22 69.51 56.10 62.20 3.05 164.00 Alpha and beta (a/b) Cytidine deaminase
1lbu-1-AS 82.93 80.49 84.15 74.39 79.27 56.10 86.59 0.00 82.00 Unknown Unknown
1pii-2-DOMAK 73.30 64.92 76.96 65.45 72.25 65.45 72.77 2.62 191.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
1cbg-1-AS 72.65 67.35 69.59 62.45 67.96 60.41 71.84 1.02 490.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
1powb-3-DOMAK 75.26 67.37 78.42 73.68 83.68 68.42 77.37 1.05 190.00 Alpha and beta (a/b) Thiamin-binding
1smnb-1-AUTO.1 63.49 63.07 58.51 61.00 63.90 61.83 66.39 1.24 241.00 Alpha and beta (a+b) Endonuclease
1horb-1-AUTO.1 75.94 73.31 69.17 63.91 74.06 58.27 75.94 1.50 266.00 Alpha and beta (a/b) Glucosamine 6-phosphate deaminase
2spt-1-DOMAK 75.47 67.92 62.26 69.81 67.92 56.60 71.70 0.00 53.00 Small proteins Kringle modules
3ecab-1-AS 72.64 67.45 75.00 67.45 63.21 62.26 73.11 3.77 212.00 Alpha and beta (a/b) Glutaminase/Asparaginase Domain I
1aorb-3-AS 60.00 62.70 57.30 58.38 61.62 54.05 62.70 5.95 185.00 All alpha Aldehyde ferredoxin oxidoreductase, C-terminal domain
1cxsa-4-AUTO.1 74.05 74.05 72.15 77.22 75.95 72.15 77.22 4.43 158.00 Unknown Unknown
3pgk-2-AS 70.48 66.19 73.33 69.05 77.14 55.71 70.95 0.95 210.00 Alpha and beta (a/b) Phosphoglycerate kinase Domain II
1lbu-2-AS 71.76 72.52 66.41 62.60 74.81 62.60 73.28 4.58 131.00 Unknown Unknown
1hcra-1-DOMAK 82.69 76.92 78.85 73.08 80.77 61.54 84.62 5.77 52.00 All alpha DNA-binding 3-helical bundle
1sfe-1-AS 74.36 60.26 62.82 57.69 61.54 50.00 71.79 6.41 78.00 Unknown Unknown
1umub-1-AS 69.23 71.15 72.12 61.54 73.08 50.96 69.23 2.88 104.00 Unknown Unknown
1rvvz-1-AUTO.1 79.22 74.03 79.22 76.62 79.22 74.68 81.17 1.95 154.00 Unknown Unknown
1znbb-1-AS 74.78 73.91 74.35 68.26 73.48 62.17 75.22 3.48 230.00 Unknown Unknown
1pda-2-AS 73.53 63.73 82.35 75.49 86.27 60.78 76.47 5.88 102.00 Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
1oxy-3-AS 75.44 70.61 75.88 69.30 78.07 58.77 78.07 2.63 228.00 All alpha Hemocyanin, middle domain II
1reqc-2-AS 75.49 76.68 72.13 64.03 75.89 61.66 76.28 0.99 506.00 Unknown Unknown
1hnf-1-AS 45.54 36.63 45.54 34.65 38.61 33.66 41.58 31.68 101.00 All beta Immunoglobulin-like beta-sandwich
1ese-1-AUTO.1 67.55 67.22 70.20 66.23 72.19 50.66 69.21 1.99 302.00 Alpha and beta (a/b) Flavodoxin-like
1otgc-1-AS 58.40 52.80 52.00 48.80 52.80 48.80 59.20 13.60 125.00 Alpha and beta (a+b) Tautomerase/MIF
1ptr-1-AUTO.1 64.00 54.00 68.00 62.00 68.00 62.00 54.00 0.00 50.00 Small proteins Protein kinase cystein-rich domain (cys2)
1qrdb-1-AUTO.1 65.57 61.54 52.75 59.71 68.86 58.24 66.67 4.40 273.00 Unknown Unknown
1oacb-2-AS.1 69.70 53.54 76.77 58.59 70.71 57.58 72.73 8.08 99.00 Alpha and beta (a+b) Cystatin-like
1gep-3-AS 60.14 62.16 61.49 61.49 64.19 55.41 62.84 8.11 148.00 Unknown Unknown
1grj-1-AS 77.03 77.03 79.73 72.97 83.78 89.19 79.73 2.70 74.00 All alpha Long alpha-hairpin
1gym-1-AUTO.1 72.64 68.92 72.30 61.82 71.28 62.16 72.30 1.01 296.00 Unknown Unknown
1dlc-3-AS.1 74.11 62.94 55.33 52.28 66.50 51.78 71.07 2.54 197.00 All beta beta-Prism I
1jud-1-GJB 79.55 73.64 71.36 69.55 77.27 62.27 79.55 1.36 220.00 Unknown Unknown
1find-2-AUTO.1 77.05 82.79 68.85 67.21 68.03 68.03 78.69 2.46 122.00 Unknown Unknown
1pbwb-1-AS 70.77 78.97 76.92 62.05 71.79 61.54 74.36 1.54 195.00 Unknown Unknown
1lba-1-DOMAK 73.29 75.34 69.86 57.53 81.51 48.63 77.40 2.74 146.00 Alpha and beta (a+b) Bacteriophage T7 lysozyme (Zn amidase)
1seib-1-AUTO.1 73.97 64.38 68.49 61.64 68.49 52.05 76.71 0.00 73.00 Unknown Unknown
1hplb-1-AS 60.65 66.27 60.65 61.54 62.72 57.40 64.50 4.44 338.00 Alpha and beta (a/b) alpha/beta-Hydrolases
1qbb-3-AUTO.1 68.94 61.70 67.70 61.49 70.39 63.98 69.36 2.28 483.00 Unknown Unknown
1nar-1-DOMAK 64.36 65.05 62.63 62.63 66.78 59.17 65.74 4.50 289.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
1dik-3-AS.1 59.03 54.17 59.72 50.00 68.06 51.39 57.64 4.17 144.00 Alpha and beta (a/b) The "swivelling" beta/beta/alpha domain
1gmpb-1-DOMAK 76.04 73.96 73.96 70.83 72.92 69.79 78.12 4.17 96.00 Alpha and beta (a+b) Microbal ribonucleases
2olba-3-AS 81.48 74.07 78.70 74.07 86.57 74.07 84.26 0.00 216.00 Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
1edd-1-DOMAK 67.10 62.58 67.10 61.29 65.48 59.35 69.68 0.65 310.00 Alpha and beta (a/b) alpha/beta-Hydrolases
1daab-1-AS 73.11 65.55 73.95 69.75 75.63 71.43 74.79 1.68 119.00 Alpha and beta (a+b) D-amino acid aminotransferase Domain I
1spbp-1-AS 64.79 53.52 57.75 49.30 45.07 39.44 64.79 12.68 71.00 Alpha and beta (a+b) Ferredoxin-like
1pyta-1-AS 77.66 71.28 75.53 60.64 69.15 63.83 79.79 2.13 94.00 Alpha and beta (a+b) Ferredoxin-like
1ppi-2-AS 67.74 72.04 68.82 52.69 64.52 63.44 68.82 4.30 93.00 All beta alpha-Amylases, beta-sheet domain
1gal-2-AS 69.83 69.83 68.97 68.97 73.28 62.07 73.28 4.31 116.00 All alpha Inserted domain into FAD (also NAD)-binding motif for Glucose oxidase
1trh-1-AS 61.61 64.23 61.24 61.99 63.11 59.36 63.11 4.68 534.00 Alpha and beta (a/b) alpha/beta-Hydrolases
1gflb-1-AS 59.13 63.91 59.13 47.83 57.83 46.09 60.43 5.65 230.00 Unknown Unknown
1gtqb-1-AUTO.1 71.74 57.97 55.07 58.70 72.46 60.87 68.12 10.14 138.00 Alpha and beta (a+b) Tetrahydrobiopterin biosynthesis enzymes
1ignb-2-GJB 70.65 63.04 70.65 53.26 64.13 45.65 69.57 0.00 92.00 Unknown Unknown
1mjc-1-DOMAK 79.71 79.71 66.67 66.67 78.26 66.67 79.71 4.35 69.00 All beta OB-fold
1udh-1-AUTO.1 75.00 67.54 74.56 67.11 75.00 54.82 76.32 1.75 228.00 Alpha and beta (a/b) Uracil-DNA glycosylase
1gcb-2-AS 79.41 76.96 80.39 65.69 83.33 60.78 82.84 3.43 204.00 Alpha and beta (a+b) Cysteine proteinases Domain II
1inp-1-AS.1 66.40 64.37 64.78 58.70 64.37 57.89 66.80 2.83 247.00 Alpha and beta (a+b) Sugar phosphatases alpha+beta N terminal domain
1eceb-1-AUTO.1 71.79 73.18 74.30 69.55 74.02 64.80 75.42 0.56 358.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
1efud-2-AUTO.1 77.53 76.40 77.53 74.16 77.53 68.54 80.90 2.25 89.00 Unknown Unknown
1qbb-1-AUTO.1 72.08 70.78 64.94 58.44 64.94 53.25 70.13 0.65 154.00 Unknown Unknown
2dkb-2-AS 75.76 69.70 80.68 73.48 79.17 71.97 78.03 4.92 264.00 Alpha and beta (a/b) PLP-dependent transferases Domain II
2reb-1-DOMAK 70.45 70.00 65.91 62.27 73.18 57.73 73.64 6.82 220.00 Alpha and beta (a+b) P-loop containing nucleotide triphosphate hydrolases, small a+b insert
1inp-2-AS.1 52.94 51.63 66.01 57.52 60.13 47.71 57.52 7.84 153.00 Alpha and beta (a/b) Sugar phosphatases alpha/beta C terminal domain
1tfr-1-GJB 53.36 52.30 57.60 57.24 59.36 54.06 55.83 7.77 283.00 Unknown Unknown
1mdaj-1-GJB 61.40 46.78 62.28 54.09 64.91 54.39 61.40 4.39 342.00 All beta 7-bladed beta-propeller
1scue-3-AS 83.89 75.84 80.54 79.19 87.92 75.17 87.25 0.00 149.00 Alpha and beta (a/b) Flavodoxin-like
1lpba-1-DOMAK 45.88 48.24 43.53 43.53 51.76 36.47 45.88 9.41 85.00 Small proteins Small inhibitors, toxins, lectins
1kte-1-AS 75.24 72.38 72.38 69.52 78.10 65.71 76.19 0.95 105.00 Alpha and beta (a/b) Thioredoxin-like
2mtac-1-AS 70.07 68.71 69.39 68.03 76.19 60.54 73.47 4.76 147.00 All alpha Cytochrome c
3cox-1-AS.1 68.15 61.15 66.24 57.01 65.92 51.59 70.06 2.87 314.00 Alpha and beta (a/b) FAD (also NAD)-binding motif
2phy-1-GJB 52.80 56.80 56.80 52.00 72.00 48.80 54.40 11.20 125.00 Alpha and beta (a+b) Profilin-like
3cox-2-AS.1 66.67 64.52 63.44 61.83 74.73 53.23 69.35 0.00 186.00 Alpha and beta (a+b) FAD-linked reductases, C-terminal domain
1fua-1-AUTO.1 77.67 72.33 76.21 73.30 77.18 67.96 79.61 0.00 206.00 Unknown Unknown
1rec-2-DOMAK 68.63 73.53 69.61 70.59 75.49 68.63 71.57 0.98 102.00 All alpha EF-hand
1scue-2-AS 80.25 77.78 77.78 69.14 82.72 65.43 81.48 0.00 81.00 Alpha and beta (a+b) ATP-grasp sub-domain II
1stme-1-AUTO.1 69.50 71.63 70.92 71.63 65.25 64.54 72.34 2.13 141.00 Unknown Unknown
1bdo-1-AS 70.00 62.50 57.50 51.25 61.25 28.75 62.50 8.75 80.00 Unknown Unknown
1nox-1-GJB 77.00 78.50 74.50 66.50 78.00 69.00 80.00 0.00 200.00 Unknown Unknown
1ovb-1-GJB 66.04 62.89 58.49 54.72 68.55 57.86 66.67 3.77 159.00 Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
1irk-1-AS 71.72 59.60 64.65 49.49 57.58 52.53 63.64 6.06 99.00 Alpha and beta (a+b) Protein kinases (PK), catalytic core N terminal Domain
2admb-1-AUTO.1 65.28 64.35 75.46 53.70 68.06 57.41 68.52 0.93 216.00 Unknown Unknown
1gog-3-AS.1 78.57 72.45 62.24 71.43 77.55 72.45 80.61 0.00 98.00 All beta Immunoglobulin-like beta-sandwich
1hnf-2-AS 73.08 74.36 52.56 52.56 76.92 44.87 75.64 0.00 78.00 All beta Immunoglobulin-like beta-sandwich
2dnja-1-AS 76.28 70.36 67.59 67.59 81.82 64.03 81.03 1.58 253.00 Alpha and beta (a+b) DNase I-like
1dupa-1-AS 67.65 70.59 66.18 69.12 62.50 72.79 68.38 8.09 136.00 All beta beta-Clip
2olba-2-AS 57.35 58.82 57.35 60.29 58.82 57.35 59.56 2.94 136.00 Alpha and beta (a+b) Phosphate binding protein-like inserted domain
1csmb-1-AUTO.1 76.19 73.81 78.57 70.24 79.76 63.49 78.17 1.98 252.00 All alpha Chorismate mutase II
1hmpb-1-AUTO.1 75.60 69.38 77.99 68.42 76.56 61.24 77.99 0.00 209.00 Alpha and beta (a/b) Phosphoribosyltransferases (PRTases)
1tif-1-AS 77.63 57.89 84.21 67.11 68.42 77.63 81.58 1.32 76.00 Alpha and beta (a+b) beta-Grasp
2tmdb-3-AS 75.66 75.00 70.39 63.16 75.66 64.47 76.32 0.66 152.00 Alpha and beta (a/b) FAD (also NAD)-binding motif
1vokb-1-AS 73.40 72.34 67.55 64.89 68.62 67.02 74.47 4.26 188.00 Unknown Unknown
1mdam-1-DOMAK 62.50 61.61 65.18 70.54 68.75 58.04 66.07 2.68 112.00 Small proteins Methylamine dehydrogenase, L-chain
1mmoh-1-AS 76.54 81.48 79.63 69.14 80.25 69.75 81.48 0.00 162.00 All alpha Methane monooxygenase hydrolase, gamma subunit
1nlkl-1-DOMAK 74.13 60.84 70.63 53.85 74.83 48.25 74.13 5.59 143.00 Alpha and beta (a+b) Ferredoxin-like
1mof-1-AS 69.81 84.91 77.36 49.06 66.04 50.94 75.47 0.00 53.00 Unknown Unknown
1ndh-1-AS 74.80 75.61 78.86 63.41 65.85 57.72 76.42 0.00 123.00 All beta Reductase/elongation factor common domain
1tsp-1-AS 54.78 61.95 61.58 51.84 62.32 51.10 60.11 8.82 544.00 All beta Single-stranded right-handed beta-helix
1dar-3-AS 42.86 45.71 42.86 54.29 51.43 42.86 42.86 0.00 35.00 Unknown Unknown
1sfe-2-AS 74.71 80.46 77.01 68.97 80.46 57.47 79.31 2.30 87.00 Unknown Unknown
1taq-2-AS 44.93 47.83 44.93 56.52 50.72 33.33 47.83 0.00 69.00 Unknown Unknown
1brse-1-DOMAK 70.93 61.63 68.60 69.77 67.44 59.30 72.09 4.65 86.00 Alpha and beta (a/b) Barstar (barnase inhibitor)
1krcb-1-AS 76.74 73.26 69.77 65.12 74.42 61.63 73.26 5.81 86.00 All beta beta-Clip
2hft-2-AS 68.93 67.96 67.96 58.25 74.76 67.96 73.79 3.88 103.00 All beta Immunoglobulin-like beta-sandwich
1delb-2-AUTO.1 62.18 58.82 62.18 63.03 71.43 45.38 68.07 7.56 119.00 Unknown Unknown
1hslb-2-DOMAK 65.69 66.67 58.82 50.00 64.71 50.98 70.59 1.96 102.00 Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
2bopa-1-DOMAK 60.00 56.47 67.06 52.94 42.35 55.29 63.53 5.88 85.00 Alpha and beta (a+b) Ferredoxin-like
1qbb-4-AUTO.1 76.12 83.58 77.61 70.15 80.60 71.64 80.60 0.00 67.00 Unknown Unknown
1alkb-1-AS 63.47 64.14 70.60 59.24 67.26 55.46 66.37 3.34 449.00 Alpha and beta (a/b) Alkaline phosphatase
1aozb-3-AS 64.35 63.43 76.39 59.26 64.81 56.48 68.52 0.00 216.00 All beta Cupredoxins
2cmd-2-GJB 75.90 73.49 72.29 67.47 78.92 69.28 80.12 0.00 166.00 Alpha and beta (a+b) Lactate & malate dehydrogenases, C-terminal domain
2afnc-2-AUTO.1 64.29 63.74 55.49 56.04 63.19 56.04 67.03 3.30 182.00 Unknown Unknown
1nbac-1-AS 74.30 62.62 75.70 58.41 75.70 57.94 76.17 2.34 214.00 Alpha and beta (a/b) N-carbamoylsarcosine amidohydrolase
1oacb-1-AS.1 52.44 56.10 43.90 52.44 63.41 39.02 56.10 8.54 82.00 Alpha and beta (a+b) Copper amino oxidase, domain 1
1vmob-1-AS 73.01 77.30 73.62 69.94 71.78 71.78 78.53 0.00 163.00 All beta beta-Prism I
1pmi-2-GJB 79.82 84.21 80.70 75.44 81.58 75.44 84.21 1.75 114.00 Unknown Unknown
3ecab-2-AS 79.82 76.32 78.95 71.93 83.33 68.42 83.33 0.00 114.00 Alpha and beta (a/b) Glutaminase/Asparaginase Domain II
1amp-1-AS 74.57 69.07 69.07 58.76 73.54 51.89 74.57 5.84 291.00 Alpha and beta (a/b) Zn-dependent exopeptidases
2yhx-3-DOMAK 48.84 38.76 59.69 63.57 62.79 62.02 52.71 4.65 129.00 Alpha and beta (a/b) Ribonuclease H-like motif
3chy-1-DOMAK 83.59 76.56 91.41 82.81 89.84 69.53 89.84 0.00 128.00 Alpha and beta (a/b) Flavodoxin-like
1hplb-2-AS 72.07 74.77 52.25 54.05 71.17 60.36 72.07 1.80 111.00 All beta Colipase binding domain-like
3pmgb-4-AS 71.83 71.13 71.83 71.83 68.31 76.76 73.24 4.23 142.00 Alpha and beta (a+b) TBP-like
1bfg-1-DOMAK 63.49 69.05 58.73 58.73 61.90 60.32 64.29 4.76 126.00 All beta beta-Trefoil
1lki-1-AS 68.02 79.65 72.09 41.86 66.86 33.72 71.51 5.81 172.00 All alpha 4-helical cytokines
1vcc-1-AS 81.82 70.13 74.03 66.23 72.73 63.64 80.52 0.00 77.00 Alpha and beta (a+b) A DNA topoisomerase I domain
2end-1-DOMAK 75.18 78.83 79.56 77.37 76.64 59.85 81.02 2.19 137.00 All alpha T4 endonuclease V
1dik-1-AS.1 70.54 74.27 74.69 65.56 74.27 62.24 75.93 2.90 241.00 Alpha and beta (a+b) ATP-grasp sub-domain I
1dfnb-1-DOMAK 83.33 56.67 46.67 56.67 56.67 56.67 76.67 0.00 30.00 Small proteins Defensin-like
1fdt-1-AS 72.63 67.72 78.60 58.95 74.04 55.79 77.89 1.40 285.00 Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1nozb-2-AUTO.1 71.56 62.67 62.67 63.56 70.67 56.00 72.89 0.89 225.00 Unknown Unknown
1dik-4-AS.1 59.32 69.77 75.14 52.26 62.71 53.67 63.84 4.24 354.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
1lis-1-DOMAK 68.70 84.73 79.39 57.25 70.23 48.85 75.57 2.29 131.00 All alpha Lysin
1tndb-2-DOMAK 80.17 78.45 79.31 66.38 87.93 62.07 85.34 0.00 116.00 All alpha Transducin (alpha subunit), insertion domain
1daab-2-AS 77.22 49.37 68.35 65.82 69.62 62.03 71.52 5.06 158.00 Alpha and beta (a+b) D-amino acid aminotransferase Domain II
1vhh-1-AS 76.43 71.34 76.43 70.06 77.07 49.68 80.89 1.27 157.00 Alpha and beta (a+b) Hedgehog/DD-peptidase
1rlds-1-DOMAK 84.21 79.82 81.58 80.70 88.60 77.19 86.84 0.88 114.00 Alpha and beta (a+b) RuBisCO, small subunit
1fjmb-2-AS 81.98 83.78 81.08 79.28 76.58 51.35 85.59 0.00 111.00 Unknown Unknown
1rec-1-DOMAK 78.31 77.11 81.93 75.90 86.75 65.06 84.34 0.00 83.00 All alpha EF-hand
1cqa-1-AUTO.1 82.93 71.54 81.30 67.48 76.42 72.36 82.11 0.81 123.00 Alpha and beta (a+b) Profilin-like
1eft-3-DOMAK 70.53 73.68 45.26 52.63 71.58 40.00 73.68 1.05 95.00 All beta Elongation factor Tu (EF-Tu), the C-terminal domain
1thx-1-AUTO.1 71.30 65.74 75.93 68.52 81.48 65.74 77.78 0.00 108.00 Alpha and beta (a/b) Thioredoxin-like
1bet-1-DOMAK 62.62 67.29 58.88 54.21 66.36 46.73 67.29 3.74 107.00 Small proteins Cystine-knot cytokines
1bam-1-AS 60.00 60.00 58.00 48.50 71.00 50.00 67.00 9.00 200.00 Alpha and beta (a/b) Restriction endonucleases
1ceo-2-AUTO.1 33.96 35.85 37.74 43.40 56.60 30.19 39.62 24.53 53.00 All alpha small domain attached to TIM barrel
1cksc-1-AUTO.1 64.10 64.10 64.10 50.00 71.79 46.15 69.23 2.56 78.00 Alpha and beta (a+b) Cell cycle regulatory proteins
2admb-2-AUTO.1 53.85 60.95 52.66 47.93 59.76 47.34 59.17 3.55 169.00 Unknown Unknown
1tul-1-JAC 57.84 61.76 48.04 53.92 73.53 47.06 62.75 14.71 102.00 Unknown Unknown
1dfji-1-AUTO.1 55.04 56.36 56.36 54.61 71.49 41.45 60.96 6.14 456.00 Unknown Unknown
1yrna-2-AS 84.13 80.95 88.89 61.90 95.24 65.08 90.48 0.00 63.00 All alpha DNA-binding 3-helical bundle
1trkb-3-AS 78.10 83.21 75.18 76.64 83.21 69.34 83.94 2.92 137.00 Alpha and beta (a/b) Transketolase, C-terminal domain
1gtmc-2-AUTO.1 61.94 65.67 66.42 63.43 72.39 58.96 68.66 2.24 134.00 Unknown Unknown
1tssb-2-DOMAK 64.38 75.34 60.27 52.05 69.86 49.32 69.86 0.00 73.00 All beta OB-fold
1mrrb-1-DOMAK 76.18 76.47 76.47 63.82 79.12 62.65 83.24 1.47 340.00 All alpha Ferritin like
1aozb-2-AS 68.93 67.96 72.33 65.05 69.42 61.65 74.27 1.46 206.00 All beta Cupredoxins
1tiic-1-GJB 66.67 75.00 75.00 66.67 69.44 75.00 75.00 11.11 36.00 Peptides Antifreeze polypeptide HPLC-6
1gpmd-4-AS 66.50 71.36 72.82 63.59 66.50 56.31 70.87 0.97 206.00 Alpha and beta (a/b) Class I glutamine amidotransferases
1han-2-AUTO.1 67.10 70.32 62.58 60.65 64.52 63.87 70.97 0.65 155.00 Alpha and beta (a+b) 2,3-Dihydroxybiphenyl dioxygenase (DHDB, BPHC enzyme)
1pkyc-3-AUTO.1 76.67 85.00 85.83 76.67 89.17 78.33 84.17 2.50 120.00 Alpha and beta (a/b) Pyruvate kinase, C-terminal domain
1edn-1-AS 57.14 66.67 71.43 57.14 33.33 52.38 57.14 0.00 21.00 Small proteins Endothelin-like
2dln-1-AS 67.86 71.43 67.86 66.67 72.62 53.57 71.43 5.95 84.00 Alpha and beta (a/b) Biotin carboxylase N-terminal domain-like
1cgu-4-GJB 76.92 81.73 80.77 71.15 80.77 64.42 84.62 0.00 104.00 All beta Prealbumin-like
1chmb-1-DOMAK 61.94 67.10 69.68 58.71 72.26 55.48 70.32 4.52 155.00 Alpha and beta (a/b) Ribonuclease H-like motif
1poc-1-DOMAK 50.00 51.49 55.22 49.25 60.45 54.48 58.21 7.46 134.00 All alpha Phospholipase A2
2hipb-1-DOMAK 42.25 49.30 56.34 53.52 50.70 47.89 49.30 0.00 71.00 Small proteins HIPIP (high potential iron protein)
1adeb-2-AUTO.1 76.00 75.00 73.00 73.00 81.00 55.00 82.00 0.00 100.00 All alpha P-loop containing nucleotide triphosphate hydrolases all helical domain
1add-1-AS 69.34 73.64 69.34 68.77 78.80 64.76 77.08 2.58 349.00 Alpha and beta (a/b) beta/alpha (TIM)-barrel
1pbp-2-DOMAK 54.55 63.07 60.23 53.41 67.05 51.14 61.36 6.25 176.00 Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
2scpb-1-DOMAK 66.67 72.99 72.41 71.84 77.01 69.54 76.44 0.57 174.00 All alpha EF-hand
1pdnc-2-AS 76.36 78.18 74.55 80.00 85.45 63.64 85.45 0.00 55.00 All alpha DNA-binding 3-helical bundle
1colb-1-DOMAK 73.60 80.71 75.63 65.48 79.70 62.44 79.19 3.05 197.00 Membrane and cell surface proteins and peptides Toxins' membrane translocation domains
1fbl-1-AS 69.71 76.57 87.43 76.57 75.43 74.86 80.57 1.71 175.00 Alpha and beta (a+b) Metzincins, catalytic (N-terminal) domain
2abk-2-AS 74.55 84.55 84.55 77.27 85.45 61.82 86.36 0.00 110.00 All alpha Endonuclease III
1ahb-2-GJB 52.24 62.69 55.22 41.79 56.72 43.28 61.19 13.43 67.00 Alpha and beta (a+b) Ribosome inactivating proteins (RIP) Domain II
1avhb-4-AS 67.57 75.68 75.68 72.97 82.43 56.76 77.03 4.05 74.00 All alpha Annexin Domain
2bltb-2-AUTO.1 63.01 64.38 69.86 60.27 76.71 38.36 75.34 0.00 73.00 All alpha beta-Lactamase/D-ala carboxypeptidasea inserted domain
1avhb-3-AS 76.74 76.74 84.88 81.40 86.05 72.09 88.37 0.00 86.00 All alpha Annexin Domain
1clc-3-AS.1 66.50 73.50 77.00 66.50 78.00 57.50 79.00 0.50 200.00 All alpha Glycosyltransferases of the superhelical fold Domain II
1yptb-1-AUTO.1 57.14 66.79 69.64 67.14 65.36 60.36 67.86 4.64 280.00 Alpha and beta (a/b) Phosphotyrosine protein phosphatases II
1bpha-1-DOMAK 57.14 57.14 47.62 66.67 57.14 42.86 66.67 0.00 21.00 Small proteins Insulin-like
2hhmb-2-DOMAK 60.77 70.00 63.85 66.92 73.08 69.23 71.54 4.62 130.00 Alpha and beta (a/b) Sugar phosphatases alpha/beta C terminal domain
1rlr-1-JAC 59.72 73.46 69.67 70.14 75.36 66.35 72.99 1.90 211.00 Unknown Unknown
1whi-1-AS 64.75 68.03 67.21 75.41 79.51 50.00 77.87 0.82 122.00 Unknown Unknown
1cdlg-1-DOMAK 75.00 95.00 45.00 30.00 80.00 25.00 85.00 0.00 20.00 Peptides Simple helix
1ctn-3-AS.1 58.90 64.38 58.90 58.90 61.64 53.42 69.86 4.11 73.00 Alpha and beta (a+b) FKBP-like
6rlxc-1-DOMAK 37.50 83.33 29.17 45.83 58.33 33.33 66.67 4.17 24.00 Small proteins Insulin-like

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