A brief description of the package

What follows is a brief overview of each application of STAMP. A detailed description of each of these can be found in later sections.

• Initial superimposition
• Pairwise comparisons and alignments (PAIRWISE)
• Multiple alignment (TREEWISE)
• Structure database scanning (SCAN)
• Displaying STAMP output (VER2HOR, DSTAMP, GSTAMP)