Directory src/jalview/appletgui/

Directory Created:
2005-05-04 16:08
Total Files:
37
Deleted Files:
1
Lines of Code:
21812

[root]/src/jalview/appletgui

Lines of Code

src/jalview/appletgui/ Lines of Code

Developers

Author Changes Lines of Code Lines per Change
Totals 1096 (100.0%) 78662 (100.0%) 71.7
andrew 779 (71.1%) 40331 (51.3%) 51.7
jprocter 246 (22.4%) 27302 (34.7%) 110.9
jimp 20 (1.8%) 7776 (9.9%) 388.8
amwaterhouse 51 (4.7%) 3253 (4.1%) 63.7

Most Recent Commits

jprocter 2010-09-14 16:49

streamlined app and applet jmol console + event handling via component listener

24 lines of code changed in:

  • src/jalview/appletgui: AppletJmol.java (+22 -13), AppletJmolBinding.java (+2 -2)
jprocter 2010-09-13 20:55

refactored to remove App reference in Applet (JAL-638)

21 lines of code changed in:

  • src/jalview/appletgui: AppletJmolBinding.java (+11), ExtJmol.java (+10)
jprocter 2010-09-13 19:24

patched Jmol and code for embedding JmolAppConsole in a JPanel (JAL-638)

13 lines of code changed in:

  • src/jalview/appletgui: AppletJmolBinding.java (+6), ExtJmol.java (+7)
jprocter 2010-08-31 17:18

notes re JAL-623 and JAL-583, new api methods for adding several structure/seq mappings at once

177 lines of code changed in:

  • src/jalview/appletgui: AlignFrame.java (+156 -102), AppletJmol.java (+21 -3)
jprocter 2010-08-27 12:34

revised sequence/structure binding so one structure associated with x-seuqenceI's

5 lines of code changed in:

  • src/jalview/appletgui: AppletJmol.java (+1 -1), AppletJmolBinding.java (+2 -2), ExtJmol.java (+2 -2)
jprocter 2010-08-25 15:12

correct initing of JmolViewer to avoid security exception in unsigned applet moed

2 lines of code changed in:

  • src/jalview/appletgui: AppletJmol.java (+2 -2)
jprocter 2010-08-25 15:12

excluded methods related to broken Jmol applet binding mechanism (JAL-621) and implemented default 'search all alignment' mode when opening a new PDB structure view

34 lines of code changed in:

  • src/jalview/appletgui: AlignFrame.java (+34 -8)
jprocter 2010-08-20 13:32

complete the sequence-structure mapping details. * JAL-582

11 lines of code changed in:

  • src/jalview/appletgui: AppletJmol.java (+11 -2)
jprocter 2010-08-20 13:32

refactor jmol api so it doesn't clash with Swing component method. * JAL-582

2 lines of code changed in:

  • src/jalview/appletgui: AppletJmolBinding.java (+1 -1), ExtJmol.java (+1 -1)
jprocter 2010-08-20 12:58

refactored external structure viewer binding API calls so they do not reference Jmol classes (re-instate's Jmol free launch of JalviewLite).

113 lines of code changed in:

  • src/jalview/appletgui: AlignFrame.java (+113 -7)
jprocter 2010-08-20 12:55

improved debug output when Jmol viewer creation fails

43 lines of code changed in:

  • src/jalview/appletgui: AppletJmol.java (+43 -57)
jprocter 2010-08-20 12:54

extend jmol binding handles selection events and add in a 'refreshPdbEntries' step so the list of PDB entries jalview knows about can be updated before a Jmol notifyUpdate event is handled

15 lines of code changed in:

  • src/jalview/appletgui: AppletJmolBinding.java (+15 -1)
jprocter 2010-08-20 12:52

binding between JalviewLite alignment windows and some external Jmol viewer

124 lines of code changed in:

  • src/jalview/appletgui: ExtJmol.java (new 124)
jprocter 2010-08-18 12:04

1.5 annotation removal

0 lines of code changed in:

  • src/jalview/appletgui: AppletJmolBinding.java (-5)
jprocter 2010-08-18 11:15

refactor to abstract jmol/jalview binding and applet and application specific sequence structure binding.

206 lines of code changed in:

  • src/jalview/appletgui: AppletJmol.java (+99 -666), AppletJmolBinding.java (new 107)
jprocter 2010-08-18 11:11

refactor to jalview.api methods

16 lines of code changed in:

  • src/jalview/appletgui: FeatureRenderer.java (+15 -3), SequenceRenderer.java (+1 -1)
jprocter 2010-07-21 16:06

URLs that begin with javascript: are opened in the same window. See
http://issues.jalview.org/browse/JAL-604

7 lines of code changed in:

  • src/jalview/appletgui: AlignFrame.java (+7 -1)
jprocter 2010-06-29 17:22

upgrading structure/sequence binding so that a structure view can contain many pdb files

306 lines of code changed in:

  • src/jalview/appletgui: AppletJmol.java (+306 -160)
jprocter 2010-06-29 17:22

new ajax api methods for linking existing jmol viewers with sequences in an alignframe

21 lines of code changed in:

  • src/jalview/appletgui: AlignFrame.java (+21)
jprocter 2010-06-17 17:07

remove source annotations

0 lines of code changed in:

  • src/jalview/appletgui: AppletJmol.java (-6)

(498 more)

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