Package | Description |
---|---|
compbio.data.sequence |
A data model for multiple sequence alignment web services and utility methods
that work on the objects of this model.
|
Modifier and Type | Method and Description |
---|---|
static Alignment |
ClustalAlignmentUtil.readClustalFile(java.io.File file) |
static Alignment |
ClustalAlignmentUtil.readClustalFile(java.io.InputStream instream)
Read Clustal formatted alignment.
|
Modifier and Type | Method and Description |
---|---|
static void |
ClustalAlignmentUtil.writeClustalAlignment(java.io.Writer out,
Alignment alignment)
Write Clustal formatted alignment Limitations: does not record the
consensus.
|