compbio.metadata

Class Preset<T>

java.lang.Object

compbio.metadata.Preset<T>

Type Parameters:

T - executable type

public class Preset<T>
extends java.lang.Object

Collection of Options and Parameters with their values

Version:

1.0 December 2009

Author:

pvtroshin

See Also:

Option, Parameter

Field Summary

Fields

Modifier and Type	Field and Description
(package private) java.lang.String	description
(package private) java.lang.String	name
(package private) java.util.List<java.lang.String>	option
private static java.lang.String	SPACE

Constructor Summary

Constructors

Constructor and Description
Preset()

Method Summary

Modifier and Type	Method and Description
(package private) boolean	containValue(java.lang.String option)
boolean	equals(java.lang.Object obj)
java.util.List<Option<T>>	getArguments(RunnerConfig<T> rconfig) Converts list of options as String to type Option
java.lang.String	getDescription()
java.lang.String	getName()
(package private) java.lang.String	getName(java.lang.String option)
java.util.List<java.lang.String>	getOptions()
(package private) java.lang.String	getValue(java.lang.String option)
int	hashCode()
void	setDescription(java.lang.String description)
void	setName(java.lang.String name)
void	setOptions(java.util.List<java.lang.String> option)
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

SPACE

private static final java.lang.String SPACE

See Also:

Constant Field Values

name

java.lang.String name

description

java.lang.String description

option

java.util.List<java.lang.String> option

Constructor Detail

Preset

public Preset()

Method Detail

setOptions

public void setOptions(java.util.List<java.lang.String> option)

setName

public void setName(java.lang.String name)

setDescription

public void setDescription(java.lang.String description)

getOptions

public java.util.List<java.lang.String> getOptions()

Returns:

a List of Options as a String

getName

public java.lang.String getName()

Returns:

- name of the Preset

getDescription

public java.lang.String getDescription()

Returns:

- a long description of the Preset

getArguments

public java.util.List<Option<T>> getArguments(RunnerConfig<T> rconfig)
                                       throws WrongParameterException

Converts list of options as String to type Option

Parameters:

rconfig -

Returns:

List of Options

Throws:

WrongParameterException - if the value of the parameter is invalid @see Parameter

containValue

boolean containValue(java.lang.String option)

getName

java.lang.String getName(java.lang.String option)

getValue

java.lang.String getValue(java.lang.String option)

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object

equals

public boolean equals(java.lang.Object obj)

Overrides:

equals in class java.lang.Object