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Evidence of Interaction Between SNRPG and TXNL4A

The interaction score between SNRPG and TXNL4A is 1.57.

This page provides the details about the evidence that was used to calculate the interaction Score between the two proteins

The Scores that are listed with each module are based on the interaction score where that module provides the only source of evidence. The final Score is the integration of all the sources of evidence.

FeatureEvidenceScore (?)
Gene Expression

Pearson's Correlation between SNRPG and TXNL4A = 0.73

The original expression data was collated from the NCBI GEO database. For further information about this dataset please refer to the NCBI GEO dataset GDS596.

 0.013
Orthology
OrganismSNRPG OrthologueTXNL4A OrthologueExperiment
AccessionInparalog ScoreAccessionInparalog Score
bakers yeast YFL017W-A 1 YPR082C 1
  • Other
  • AffinityCaptureMS

Get References From PubMed
fly Q9VXE0 1 Q8SZ87 1

The Inparalog Score is calculated by InParanoid

The experiment type Other refers to techniques other than Y2H, MS, Immunoprecipitation, SurfacePlasmonResonance, XrayDiffraction, Xlinking, CompetitionBinding, Immunofluorescence, GelRetardationAssay, AffinityChromatography, InVitroBinding, InVitro, InVivo, FarWestern, pullDown, AffinityCaptureMS, EpistaticMiniArrayProfile, AffinityCaptureWestern, BiochemicalActivity, CoCrystalStructure, FRET, ReconstitutedComplex, CoLocalization, CoPurification or CoFractionation.

 0.593
Domains No domains were used in calculating likelihood of interaction 1.48E-3
Post-translational Modifications No PTMs were used in calculating likelihood of interaction
Localisation

Protein: SNRPG

LocalisationReference
Nucleus HPRD
Cytoplasm HPRD

Protein: TXNL4A

LocalisationReference
Nucleus HPRD
Transitive Score

The common interactors between SNRPG and TXNL4A that are considered by the Transitive module are listed below.

The Scores listed are the values used by the transitive module to calculate the final interaction Score between SNRPG andTXNL4A. The values listed are therefore not the final Score value for the listed interactions.

With a Score value ≥0.025 , SNRPG has 256 interactors and TXNL4A has 79 interactors of which there are 32 common interactors.

Common InteractorName of Common InteractorScore for SNRPG-Interactor (?)Score for TXNL4A-Interactor (?)
SNRPD3 SNRPD3: Small nuclear ribonucleoprotein Sm D3 2.07E3 1.82
LSM4 LSM4: U6 snRNA-associated Sm-like protein LSm4 691.00 3.89
KIAA0788 ASCC3L1, HELIC2, KIAA0788: U5 small nuclear ribonucleoprotein 200 kDa helicase 32.60 6.05
PRP19 PRPF19, NMP200, PRP19, SNEV: Pre-mRNA-processing factor 19 25.60 1.01
SF3B3 N/A 3.89 0.038
LSM7 LSM7: U6 snRNA-associated Sm-like protein LSm7 2.60 3.89
SNRPF SNRPF, PBSCF: Small nuclear ribonucleoprotein F 2.60 1.82
PRPF3 PRPF3, HPRP3, PRP3: U4/U6 small nuclear ribonucleoprotein Prp3 1.49 1.10
LSM6 LSM6: U6 snRNA-associated Sm-like protein LSm6 1.22 1.82
PRPF31 PRPF31, PRP31: U4/U6 small nuclear ribonucleoprotein Prp31 1.10 1.10
PRPF6 PRPF6, C20orf14: Pre-mRNA-processing factor 6 0.890 6.05
DHX15 DHX15, DBP1, DDX15: Putative pre-mRNA-splicing factor ATP-dependent RNA helicase 0.293 0.042
DDX21 DDX21: Nucleolar RNA helicase 2 0.293 0.042
EIF4A1 EIF4A1, DDX2A, EIF4A: Eukaryotic initiation factor 4A-I 0.263 0.038
BOP1 BOP1, KIAA0124: Ribosome biogenesis protein BOP1 0.263 0.038
DDX50 DDX50: ATP-dependent RNA helicase DDX50 0.137 0.0255
GNB2L1 Lung cancer oncogene 7 0.137 0.0255
CHD4 CHD4: Chromodomain-helicase-DNA-binding protein 4 0.137 0.042
DDX46 DDX46, KIAA0801: Probable ATP-dependent RNA helicase DDX46 0.137 0.0255
DDX47 E4-DBP: DEAD box protein 0.123 0.038
PPP2R2A PPP2R2A: Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alp 0.123 0.038
EIF3S2 EIF3S2, TRIP1: Eukaryotic translation initiation factor 3 subunit 2 0.123 0.038
WDR77 WDR77, HKMT1069, hCG_39991: Androgen receptor cofactor p44 0.123 0.038
DDX49 DDX49: Probable ATP-dependent RNA helicase DDX49 0.123 0.038
NULL N/A 0.119 0.119
SMARCA4 SMARCA4, BRG1, SNF2B, SNF2L4: Probable global transcription activator SNF2L4 0.083 0.042
SERBP1 N/A 0.082 0.027
DDX54 DDX54: ATP-dependent RNA helicase DDX54 0.074 0.038
DDX41 DDX41, ABS: Probable ATP-dependent RNA helicase DDX41 0.074 0.038
DDX48 EIF4A3, DDX48, KIAA0111: Eukaryotic initiation factor 4A-III 0.074 0.038
WDR39 CIAO1, WDR39: Protein CIAO1 0.060 0.038
DHX38 DHX38, DDX38, KIAA0224, PRP16: Pre-mRNA-splicing factor ATP-dependent RNA helica 0.060 4.88
2.15E-3
Total Score 1.57