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Evidence of Interaction Between SNRPG and CSE1L

The interaction score between SNRPG and CSE1L is 1.86.

This page provides the details about the evidence that was used to calculate the interaction Score between the two proteins

The Scores that are listed with each module are based on the interaction score where that module provides the only source of evidence. The final Score is the integration of all the sources of evidence.

FeatureEvidenceScore (?)
Gene Expression

Pearson's Correlation between SNRPG and CSE1L = 0.84

The original expression data was collated from the NCBI GEO database. For further information about this dataset please refer to the NCBI GEO dataset GDS596.

 0.027
Orthology
OrganismSNRPG OrthologueCSE1L OrthologueExperiment
AccessionInparalog ScoreAccessionInparalog Score
bakers yeast YFL017W-A 1 YGL238W 1
worm Q9N4G9 1 Q965V4 1
fly Q9VXE0 1 Q9XZU1 1

The Inparalog Score is calculated by InParanoid

The experiment type Other refers to techniques other than Y2H, MS, Immunoprecipitation, SurfacePlasmonResonance, XrayDiffraction, Xlinking, CompetitionBinding, Immunofluorescence, GelRetardationAssay, AffinityChromatography, InVitroBinding, InVitro, InVivo, FarWestern, pullDown, AffinityCaptureMS, EpistaticMiniArrayProfile, AffinityCaptureWestern, BiochemicalActivity, CoCrystalStructure, FRET, ReconstitutedComplex, CoLocalization, CoPurification or CoFractionation.

 2.23E-3
Domains No domains were used in calculating likelihood of interaction 8.25E-4
Post-translational Modifications

Protein: SNRPG

PTMResidueReference

Protein: CSE1L

PTMResidueReference
N-acetylmethionine 1 HPRD
Localisation

Protein: SNRPG

LocalisationReference
Nucleus HPRD
Cytoplasm HPRD

Protein: CSE1L

LocalisationReference
Nucleus HPRD
Secreted HPRD
Cytoplasm HPRD
Transitive Score

The common interactors between SNRPG and CSE1L that are considered by the Transitive module are listed below.

The Scores listed are the values used by the transitive module to calculate the final interaction Score between SNRPG andCSE1L. The values listed are therefore not the final Score value for the listed interactions.

With a Score value ≥0.025 , SNRPG has 256 interactors and CSE1L has 413 interactors of which there are 40 common interactors.

Common InteractorName of Common InteractorScore for SNRPG-Interactor (?)Score for CSE1L-Interactor (?)
SNRPD1 SNRPD1: Small nuclear ribonucleoprotein Sm D1 2.07E3 0.033
LSM5 LSM5: U6 snRNA-associated Sm-like protein LSm5 691.00 0.033
PRPF4 PRPF4, PRP4: U4/U6 small nuclear ribonucleoprotein Prp4 69.60 0.038
SNRPA1 SNRPA1: U2 small nuclear ribonucleoprotein A' 3.89 0.051
PRPF6 PRPF6, C20orf14: Pre-mRNA-processing factor 6 0.890 0.060
NUP37 NUP37: Nucleoporin Nup37 0.789 0.051
SNRP70 SNRP70, RNPU1Z, RPU1, U1AP1: U1 small nuclear ribonucleoprotein 70 kDa 0.657 0.0735
LUC7L N/A 0.593 0.593
CROP CROP, CREAP1, O48: Cisplatin resistance-associated overexpressed protein 0.300 0.300
RBBP4 RBBP4, RBAP48: Histone-binding protein RBBP4 0.263 0.0525
CDC20 CDC20: Cell division cycle protein 20 homolog 0.263 0.112
CGI-48 UTP18, WDR50, CDABP0061, CGI-48: U3 small nucleolar RNA-associated protein 18 ho 0.123 0.160
EIF3S2 EIF3S2, TRIP1: Eukaryotic translation initiation factor 3 subunit 2 0.123 0.032
IEF-SSP-9502 PWP1: Periodic tryptophan protein 1 homolog 0.123 0.045
STRAP STRAP, MAWD, UNRIP: Serine-threonine kinase receptor-associated protein 0.123 0.038
CHAF1B CHAF1B, CAF1A, CAF1P60, MPHOSPH7, MPP7: Chromatin assembly factor 1 subunit B 0.123 0.0525
PAK1IP1 PAK1IP1, PIP1, WDR84: p21-activated protein kinase-interacting protein 1 0.123 0.032
CSTF1 CSTF1: Cleavage stimulation factor 50 kDa subunit 0.123 0.0525
LUC7L2 N/A 0.119 0.119
NUTF2 NUTF2, NTF2: Nuclear transport factor 2 0.0968 0.123
SMARCA4 SMARCA4, BRG1, SNF2B, SNF2L4: Probable global transcription activator SNF2L4 0.083 0.059
SERBP1 N/A 0.082 0.027
BTAF1 BTAF1, TAF172: TATA-binding protein-associated factor 172 0.074 0.026
COPB2 COPB2: Coatomer subunit beta' 0.074 0.026
BLM BLM, RECQ2, RECQL3: Bloom syndrome protein 0.074 0.032
WRN WRN, RECQ3, RECQL2: Werner syndrome ATP-dependent helicase 0.074 0.032
WDHD1 WDHD1, AND1: WD repeat and HMG-box DNA-binding protein 1 0.060 0.026
Nle NLE1, HUSSY-07: Notchless protein homolog 1 0.060 0.026
PARN PARN, DAN: Poly(A)-specific ribonuclease PARN 0.044 0.035
EIF2S1 EIF2S1, EIF2A: Eukaryotic translation initiation factor 2 subunit 1 0.044 0.141
SSRP1 SSRP1, FACT80: FACT complex subunit SSRP1 0.044 0.112
ZWILCH Protein zwilch homolog. 0.027 0.027
PTD004 N/A 0.027 0.027
MRPL22 MRPL22, HSPC158: 39S ribosomal protein L22, mitochondrial precursor 0.027 0.027
ZWINT N/A 0.027 0.027
C18orf56 N/A 0.027 0.027
HMMR HMMR: Hyaluronan-mediated motility receptor 0.027 0.027
BUB3 N/A 0.027 0.027
C22orf18 N/A 0.027 0.027
SMC4L1 N/A 0.027 0.027
0.572
Total Score 1.86