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Evidence of Interaction Between SNRPG and SART1

The interaction score between SNRPG and SART1 is 2.64.

This page provides the details about the evidence that was used to calculate the interaction Score between the two proteins

The Scores that are listed with each module are based on the interaction score where that module provides the only source of evidence. The final Score is the integration of all the sources of evidence.

FeatureEvidenceScore (?)
Gene Expression

Pearson's Correlation between SNRPG and SART1 = 0.70

The original expression data was collated from the NCBI GEO database. For further information about this dataset please refer to the NCBI GEO dataset GDS596.

 0.013
Orthology
OrganismSNRPG OrthologueSART1 OrthologueExperiment
AccessionInparalog ScoreAccessionInparalog Score
bakers yeast YFL017W-A 1 YOR308C 1
  • Other
  • AffinityCaptureMS

Get References From PubMed
worm Q9N4G9 1 O01524 1
fly Q9VXE0 1 Q95TU2 1

The Inparalog Score is calculated by InParanoid

The experiment type Other refers to techniques other than Y2H, MS, Immunoprecipitation, SurfacePlasmonResonance, XrayDiffraction, Xlinking, CompetitionBinding, Immunofluorescence, GelRetardationAssay, AffinityChromatography, InVitroBinding, InVitro, InVivo, FarWestern, pullDown, AffinityCaptureMS, EpistaticMiniArrayProfile, AffinityCaptureWestern, BiochemicalActivity, CoCrystalStructure, FRET, ReconstitutedComplex, CoLocalization, CoPurification or CoFractionation.

 0.593
Domains No domains were used in calculating likelihood of interaction N/A
Post-translational Modifications No PTMs were used in calculating likelihood of interaction
Localisation No localisation data was used in calculating likelihood of interaction
Transitive Score

The common interactors between SNRPG and SART1 that are considered by the Transitive module are listed below.

The Scores listed are the values used by the transitive module to calculate the final interaction Score between SNRPG andSART1. The values listed are therefore not the final Score value for the listed interactions.

With a Score value ≥0.025 , SNRPG has 256 interactors and SART1 has 56 interactors of which there are 21 common interactors.

Common InteractorName of Common InteractorScore for SNRPG-Interactor (?)Score for SART1-Interactor (?)
SNRPD3 SNRPD3: Small nuclear ribonucleoprotein Sm D3 2.07E3 5.94
LSM4 LSM4: U6 snRNA-associated Sm-like protein LSm4 691.00 1.84
PRPF4 PRPF4, PRP4: U4/U6 small nuclear ribonucleoprotein Prp4 69.60 3.05
KIAA0788 ASCC3L1, HELIC2, KIAA0788: U5 small nuclear ribonucleoprotein 200 kDa helicase 32.60 5.94
PRP19 PRPF19, NMP200, PRP19, SNEV: Pre-mRNA-processing factor 19 25.60 3.05
LSM7 LSM7: U6 snRNA-associated Sm-like protein LSm7 2.60 6.52
PRPF8 PRPF8, PRPC8: Pre-mRNA-processing-splicing factor 8 1.84 3.05
PRPF3 PRPF3, HPRP3, PRP3: U4/U6 small nuclear ribonucleoprotein Prp3 1.49 1.84
LSM2 LSM2, C6orf28, G7b: U6 snRNA-associated Sm-like protein LSm2 1.22 3.59
LSM6 LSM6: U6 snRNA-associated Sm-like protein LSm6 1.22 3.05
PRPF31 PRPF31, PRP31: U4/U6 small nuclear ribonucleoprotein Prp31 1.10 1.84
PRPF6 PRPF6, C20orf14: Pre-mRNA-processing factor 6 0.890 3.05
GNB2L1 Lung cancer oncogene 7 0.137 0.025
CHD4 CHD4: Chromodomain-helicase-DNA-binding protein 4 0.137 0.025
DDX46 DDX46, KIAA0801: Probable ATP-dependent RNA helicase DDX46 0.137 0.025
TAF5 TAF5, TAF2D: Transcription initiation factor TFIID subunit 5 0.123 1.84
NULL N/A 0.119 0.119
SMARCA4 SMARCA4, BRG1, SNF2B, SNF2L4: Probable global transcription activator SNF2L4 0.083 0.025
PTGES3 PTGES3, P23, TEBP: Prostaglandin E synthase 3 0.082 0.025
C11orf58 SMAP, C11orf58: Small acidic protein 0.027 0.025
NOLC1 NOLC1, KIAA0035: Nucleolar phosphoprotein p130 0.027 0.025
2.15E-3
Total Score 2.64