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Evidence of Interaction Between SNRPG and EIF2B1

The interaction score between SNRPG and EIF2B1 is 1.37.

This page provides the details about the evidence that was used to calculate the interaction Score between the two proteins

The Scores that are listed with each module are based on the interaction score where that module provides the only source of evidence. The final Score is the integration of all the sources of evidence.

FeatureEvidenceScore (?)
Gene Expression

Pearson's Correlation between SNRPG and EIF2B1 = 0.79

The original expression data was collated from the NCBI GEO database. For further information about this dataset please refer to the NCBI GEO dataset GDS596.

0.013
Orthology
OrganismSNRPG OrthologueEIF2B1 OrthologueExperiment
AccessionInparalog ScoreAccessionInparalog Score
bakers yeast YFL017W-A 1 YKR026C 1
worm Q9N4G9 1 P34604 1
fly Q9VXE0 1 Q9GQ89 1

The Inparalog Score is calculated by InParanoid

The experiment type Other refers to techniques other than Y2H, MS, Immunoprecipitation, SurfacePlasmonResonance, XrayDiffraction, Xlinking, CompetitionBinding, Immunofluorescence, GelRetardationAssay, AffinityChromatography, InVitroBinding, InVitro, InVivo, FarWestern, pullDown, AffinityCaptureMS, EpistaticMiniArrayProfile, AffinityCaptureWestern, BiochemicalActivity, CoCrystalStructure, FRET, ReconstitutedComplex, CoLocalization, CoPurification or CoFractionation.

2.23E-3
Domains No domains were used in calculating likelihood of interaction N/A
Post-translational Modifications No PTMs were used in calculating likelihood of interaction
Localisation No localisation data was used in calculating likelihood of interaction
Transitive Score

The common interactors between SNRPG and EIF2B1 that are considered by the Transitive module are listed below.

The Scores listed are the values used by the transitive module to calculate the final interaction Score between SNRPG andEIF2B1. The values listed are therefore not the final Score value for the listed interactions.

With a Score value ≥0.025 , SNRPG has 256 interactors and EIF2B1 has 107 interactors of which there are 17 common interactors.

Common InteractorName of Common InteractorScore for SNRPG-Interactor (?)Score for EIF2B1-Interactor (?)
LSM5 LSM5: U6 snRNA-associated Sm-like protein LSm5 691.00 3.05
PRP19 PRPF19, NMP200, PRP19, SNEV: Pre-mRNA-processing factor 19 25.60 2.13
SNRPE SNRPE: Small nuclear ribonucleoprotein E 8.73 0.027
LSM1 LSM1, CASM: U6 snRNA-associated Sm-like protein LSm1 1.22 3.05
DHX15 DHX15, DBP1, DDX15: Putative pre-mRNA-splicing factor ATP-dependent RNA helicase 0.293 0.027
CHD4 CHD4: Chromodomain-helicase-DNA-binding protein 4 0.137 0.027
GTF3C2 GTF3C2, KIAA0011: General transcription factor 3C polypeptide 2 0.137 0.027
PTGES3 PTGES3, P23, TEBP: Prostaglandin E synthase 3 0.082 0.027
HNRPC N/A 0.049 0.027
EIF2S1 EIF2S1, EIF2A: Eukaryotic translation initiation factor 2 subunit 1 0.044 3.68
NOL7 NOL7, C6orf90, NOP27: Nucleolar protein 7 0.027 0.027
C11orf58 SMAP, C11orf58: Small acidic protein 0.027 0.027
HNRPD N/A 0.027 0.027
BUB3 N/A 0.027 0.027
DKFZP586L0724 NOL11, L14: Nucleolar protein 11 0.027 0.027
PSMA1 PSMA1, PROS30, PSC2: Proteasome subunit alpha type-1 0.027 0.027
KARS KARS, KIAA0070: Lysyl-tRNA synthetase 0.027 0.0331
0.299
Total Score 1.37