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Evidence of Interaction Between SNRPG and MAPRE1

The interaction score between SNRPG and MAPRE1 is 1.86.

This page provides the details about the evidence that was used to calculate the interaction Score between the two proteins

The Scores that are listed with each module are based on the interaction score where that module provides the only source of evidence. The final Score is the integration of all the sources of evidence.

FeatureEvidenceScore (?)
Gene Expression

Pearson's Correlation between SNRPG and MAPRE1 = 0.81

The original expression data was collated from the NCBI GEO database. For further information about this dataset please refer to the NCBI GEO dataset GDS596.

 0.027
Orthology
OrganismSNRPG OrthologueMAPRE1 OrthologueExperiment
AccessionInparalog ScoreAccessionInparalog Score
bakers yeast YFL017W-A 1 YER016W 1
worm Q9N4G9 1 Q9GRZ0 0.308
worm Q9N4G9 1 Q9GRZ1 1
fly Q9VXE0 1 Q8IQA0 1

The Inparalog Score is calculated by InParanoid

The experiment type Other refers to techniques other than Y2H, MS, Immunoprecipitation, SurfacePlasmonResonance, XrayDiffraction, Xlinking, CompetitionBinding, Immunofluorescence, GelRetardationAssay, AffinityChromatography, InVitroBinding, InVitro, InVivo, FarWestern, pullDown, AffinityCaptureMS, EpistaticMiniArrayProfile, AffinityCaptureWestern, BiochemicalActivity, CoCrystalStructure, FRET, ReconstitutedComplex, CoLocalization, CoPurification or CoFractionation.

 2.23E-3
Domains No domains were used in calculating likelihood of interaction 8.25E-4
Post-translational Modifications

Protein: SNRPG

PTMResidueReference

Protein: MAPRE1

PTMResidueReference
N-acetylalanine 1 HPRD
Phosphotyrosine 123 HPRD
Localisation

Protein: SNRPG

LocalisationReference
Nucleus HPRD
Cytoplasm HPRD

Protein: MAPRE1

LocalisationReference
Centrosome HPRD
Cytoplasm HPRD
Cytoskeleton HPRD
Transitive Score

The common interactors between SNRPG and MAPRE1 that are considered by the Transitive module are listed below.

The Scores listed are the values used by the transitive module to calculate the final interaction Score between SNRPG andMAPRE1. The values listed are therefore not the final Score value for the listed interactions.

With a Score value ≥0.025 , SNRPG has 256 interactors and MAPRE1 has 1106 interactors of which there are 50 common interactors.

Common InteractorName of Common InteractorScore for SNRPG-Interactor (?)Score for MAPRE1-Interactor (?)
SNRPD1 SNRPD1: Small nuclear ribonucleoprotein Sm D1 2.07E3 0.066
SNRPD3 SNRPD3: Small nuclear ribonucleoprotein Sm D3 2.07E3 0.141
KIAA0788 ASCC3L1, HELIC2, KIAA0788: U5 small nuclear ribonucleoprotein 200 kDa helicase 32.60 0.066
SNRPA1 SNRPA1: U2 small nuclear ribonucleoprotein A' 3.89 0.051
LSM8 LSM8: U6 snRNA-associated Sm-like protein LSm8 2.60 0.033
LSM2 LSM2, C6orf28, G7b: U6 snRNA-associated Sm-like protein LSm2 1.22 0.040
SF3B1 SF3B1, SAP155: Splicing factor 3B subunit 1 0.890 0.763
SNRP70 SNRP70, RNPU1Z, RPU1, U1AP1: U1 small nuclear ribonucleoprotein 70 kDa 0.657 0.032
DDX21 DDX21: Nucleolar RNA helicase 2 0.293 0.157
RBBP4 RBBP4, RBAP48: Histone-binding protein RBBP4 0.263 0.033
CDC20 CDC20: Cell division cycle protein 20 homolog 0.263 0.032
SMARCA5 SMARCA5, SNF2H, WCRF135: SWI/SNF-related matrix-associated actin-dependent regul 0.263 0.066
GNB2L1 Lung cancer oncogene 7 0.137 0.074
CHD4 CHD4: Chromodomain-helicase-DNA-binding protein 4 0.137 0.037
DDX46 DDX46, KIAA0801: Probable ATP-dependent RNA helicase DDX46 0.137 0.157
EIF3S2 EIF3S2, TRIP1: Eukaryotic translation initiation factor 3 subunit 2 0.123 0.066
IEF-SSP-9502 PWP1: Periodic tryptophan protein 1 homolog 0.123 0.129
SND1 SND1, TDRD11: Staphylococcal nuclease domain-containing protein 1 0.123 0.066
CHAF1B CHAF1B, CAF1A, CAF1P60, MPHOSPH7, MPP7: Chromatin assembly factor 1 subunit B 0.123 0.032
PAK1IP1 PAK1IP1, PIP1, WDR84: p21-activated protein kinase-interacting protein 1 0.123 0.032
CSTF1 CSTF1: Cleavage stimulation factor 50 kDa subunit 0.123 0.040
SMARCA4 SMARCA4, BRG1, SNF2B, SNF2L4: Probable global transcription activator SNF2L4 0.083 0.0446
SERBP1 N/A 0.082 0.027
PTGES3 PTGES3, P23, TEBP: Prostaglandin E synthase 3 0.082 0.053
CORO1C CORO1C, CRNN4: Coronin-1C 0.074 0.066
DDX3X DDX3X, DBX, DDX3: ATP-dependent RNA helicase DDX3X 0.074 0.066
LRBA LRBA, BGL, CDC4L, LBA: Lipopolysaccharide-responsive and beige-like anchor prote 0.074 0.060
BTAF1 BTAF1, TAF172: TATA-binding protein-associated factor 172 0.074 0.503
COPA COPA: Coatomer subunit alpha 0.074 0.129
DDX41 DDX41, ABS: Probable ATP-dependent RNA helicase DDX41 0.074 0.066
BLM BLM, RECQ2, RECQL3: Bloom syndrome protein 0.074 0.032
WDR1 N/A 0.067 0.074
PIK3R4 PIK3R4: Phosphoinositide 3-kinase regulatory subunit 4 0.060 0.060
DHX16 DHX16, DBP2, DDX16, KIAA0577: Putative pre-mRNA-splicing factor ATP-dependent RN 0.060 0.066
DICER1 DICER1, DICER, HERNA, KIAA0928: Endoribonuclease Dicer 0.044 0.040
ERCC3 ERCC3, XPB, XPBC: TFIIH basal transcription factor complex helicase XPB subunit 0.044 0.032
SKIV2L SKIV2L, XXbac-BCX116I9.5-001, XXbac-BPG116M5.1-001: Superkiller viralicidic acti 0.044 0.032
ARPC1B ARC41, ARPC1B: Actin-related protein 2/3 complex subunit 1B 0.044 0.066
GNB1 GNB1: Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 0.044 0.040
DDX5 DDX5, G17P1, HELR, HLR1: Probable ATP-dependent RNA helicase DDX5 0.044 0.066
HIRA HIRA, DGCR1, HIR, TUPLE1: Protein HIRA 0.044 0.046
EIF2S1 EIF2S1, EIF2A: Eukaryotic translation initiation factor 2 subunit 1 0.044 0.066
SSRP1 SSRP1, FACT80: FACT complex subunit SSRP1 0.044 0.066
BCDO2 PTS: 6-pyruvoyl tetrahydrobiopterin synthase 0.036 0.029
DDX3Y DDX3Y, DBY: ATP-dependent RNA helicase DDX3Y 0.036 0.032
C11orf58 SMAP, C11orf58: Small acidic protein 0.027 0.053
ILF2 ILF2, NF45, PRO3063: Interleukin enhancer-binding factor 2 0.027 0.027
HNRPD N/A 0.027 0.027
BUB3 N/A 0.027 0.027
PSMA1 PSMA1, PROS30, PSC2: Proteasome subunit alpha type-1 0.027 0.049
0.572
Total Score 1.86