Home
Advanced Search
Help
Update History
Statistics
Downloads
The Barton Group
<<< Back to SNRPG

Evidence of Interaction Between SNRPG and IPI00033904

The interaction score between SNRPG and IPI00033904 is 2.64.

This page provides the details about the evidence that was used to calculate the interaction Score between the two proteins

The Scores that are listed with each module are based on the interaction score where that module provides the only source of evidence. The final Score is the integration of all the sources of evidence.

FeatureEvidenceScore (?)
Gene Expression

Pearson's Correlation between SNRPG and IPI00033904 = 0.71

The original expression data was collated from the NCBI GEO database. For further information about this dataset please refer to the NCBI GEO dataset GDS596.

 0.013
Orthology
OrganismSNRPG OrthologueIPI00033904 OrthologueExperiment
AccessionInparalog ScoreAccessionInparalog Score
bakers yeast YFL017W-A 1 YLR441C 0.944
bakers yeast YFL017W-A 1 YML063W 1
worm Q9N4G9 1 P48154 1
fly Q9VXE0 1 Q8IMA9 1

The Inparalog Score is calculated by InParanoid

The experiment type Other refers to techniques other than Y2H, MS, Immunoprecipitation, SurfacePlasmonResonance, XrayDiffraction, Xlinking, CompetitionBinding, Immunofluorescence, GelRetardationAssay, AffinityChromatography, InVitroBinding, InVitro, InVivo, FarWestern, pullDown, AffinityCaptureMS, EpistaticMiniArrayProfile, AffinityCaptureWestern, BiochemicalActivity, CoCrystalStructure, FRET, ReconstitutedComplex, CoLocalization, CoPurification or CoFractionation.

 2.23E-3
Domains No domains were used in calculating likelihood of interaction N/A
Post-translational Modifications No PTMs were used in calculating likelihood of interaction
Localisation No localisation data was used in calculating likelihood of interaction
Transitive Score

The common interactors between SNRPG and IPI00033904 that are considered by the Transitive module are listed below.

The Scores listed are the values used by the transitive module to calculate the final interaction Score between SNRPG andIPI00033904. The values listed are therefore not the final Score value for the listed interactions.

With a Score value ≥0.025 , SNRPG has 256 interactors and IPI00033904 has 217 interactors of which there are 21 common interactors.

Common InteractorName of Common InteractorScore for SNRPG-Interactor (?)Score for IPI00033904-Interactor (?)
SNRPD3 SNRPD3: Small nuclear ribonucleoprotein Sm D3 2.07E3 0.0479
KIAA0788 ASCC3L1, HELIC2, KIAA0788: U5 small nuclear ribonucleoprotein 200 kDa helicase 32.60 0.0479
PRP19 PRPF19, NMP200, PRP19, SNEV: Pre-mRNA-processing factor 19 25.60 0.371
SF3B1 SF3B1, SAP155: Splicing factor 3B subunit 1 0.890 0.0479
DHX15 DHX15, DBP1, DDX15: Putative pre-mRNA-splicing factor ATP-dependent RNA helicase 0.293 0.027
DDX21 DDX21: Nucleolar RNA helicase 2 0.293 0.025
DDX50 DDX50: ATP-dependent RNA helicase DDX50 0.137 0.027
GNB2L1 Lung cancer oncogene 7 0.137 0.160
DDX46 DDX46, KIAA0801: Probable ATP-dependent RNA helicase DDX46 0.137 0.025
PPP2R2A PPP2R2A: Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alp 0.123 0.371
IEF-SSP-9502 PWP1: Periodic tryptophan protein 1 homolog 0.123 0.0479
PTGES3 PTGES3, P23, TEBP: Prostaglandin E synthase 3 0.082 0.025
PWP2H PWP2, PWP2H: Periodic tryptophan protein 2 homolog 0.074 1.49
HNRPC N/A 0.049 0.027
DDX5 DDX5, G17P1, HELR, HLR1: Probable ATP-dependent RNA helicase DDX5 0.044 0.0479
DDX52 DDX52, ROK1, HUSSY-19: Probable ATP-dependent RNA helicase DDX52 0.036 0.902
C11orf58 SMAP, C11orf58: Small acidic protein 0.027 0.053
HNRPD N/A 0.027 0.027
DKFZP586L0724 NOL11, L14: Nucleolar protein 11 0.027 0.027
PSMA1 PSMA1, PROS30, PSC2: Proteasome subunit alpha type-1 0.027 0.027
KARS KARS, KIAA0070: Lysyl-tRNA synthetase 0.027 0.027
0.572
Total Score 2.64