3 Dee - Database of Protein Domain Definitions
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The current cluster is formed at a score of 4.187
Ascend tree (bring in more domains)
Classes
% of representative set
undefined
33.33
Peptides
16.67
All alpha
50.00
Breakdown into folds
% of cluster
% of class
undefined
undefined from 3Dee
33.33
0.31
Peptides
Transmembrane helical fragments from 3Dee
16.67
2.04
All alpha
Long alpha-hairpin
from SCOP
33.33
0.99
ROP protein from 3Dee
16.67
0.49
It is formed by merging the following clusters
Cluster 0
All domains in cluster 0 sub-divide into single membered clusters
1lre-1
[
seq. related domains
]
undefined
undefined
Cluster 1
Descend tree into cluster 1
1kfd-2
[
seq. related domains
]
All alpha
Long alpha-hairpin
1grj-1
[
seq. related domains
]
All alpha
Long alpha-hairpin
1gtoa-1
[
seq. related domains
]
All alpha
ROP protein
1bhb-1
[
seq. related domains
]
Peptides
Transmembrane helical fragments
1aikn-1
[
seq. related domains
]
undefined
undefined
View superpositions of "checked" domains
Enter PDB code - optionally suffixing the code with the chain id.
3dee@compbio.dundee.ac.uk