3 Dee - Database of Protein Domain Definitions

The current cluster is formed at a score of 0.102

Ascend tree (bring in more domains)

Go to (document sections)

• Classes

• All alpha folds
• All beta folds
• Alpha and beta (a+b) folds
• Alpha and beta (a/b) folds
• Membrane and cell surface proteins and peptides folds
• Peptides folds
• Small proteins folds
• undefined folds

• Cluster 1
• Cluster 2
• Cluster 3
• Cluster 4
• Cluster 5

Breakdown into folds	% of cluster	% of class
undefined
undefined from 3Dee	42.39	20.60
Small proteins
Crambin-like from SCOP	0.32	0.87
Glucocorticoid receptor-like (DNA-binding domain) from SCOP	0.32	0.87
Heat-stable enterotoxin B from 3Dee	0.32	0.87
Insulin-like from SCOP	0.32	0.87
Peptides
Transmembrane helical fragments from 3Dee	0.32	2.04
Membrane and cell surface proteins and peptides
Membrane all-alpha from SCOP	0.32	9.09
Toxins' membrane translocation domains from SCOP	0.97	27.27
Alpha and beta (a/b)
ATP pyrophosphatases extra domain from 3Dee	0.32	0.36
Barstar (barnase inhibitor) from SCOP	0.32	0.36
DNA-binding winged domain from 3Dee	0.65	0.73
DNA/RNA polymerases Domain III from 3Dee	0.32	0.36
Glycinamide ribonucleotide transformylase Domain II from 3Dee	0.32	0.36
gamma,delta Resolvase, large fragment from 3Dee	0.32	0.36
Alpha and beta (a+b)
Cysteine proteinases Domain II from 3Dee	0.32	0.52
FAD/NAD-linked reductases, dimerisation (C-terminal) domain from 3Dee	0.65	1.04
Lysozyme-like Domain I from 3Dee	0.65	1.04
N-terminal domain of enolase & muconate-lactonizing enzyme from 3Dee	0.97	1.55
Nucleotidyltransferases Domain II from 3Dee	0.32	0.52
Protein kinases (PK), catalytic core C terminal Domain from 3Dee	0.65	1.04
Ribosome inactivating proteins (RIP) Domain I from 3Dee	0.32	0.52
Ribosome inactivating proteins (RIP) Domain II from 3Dee	0.65	1.04
Tetrahydrobiopterin biosynthesis enzymes from 3Dee	0.32	0.52
The intermediate domain of GroEL from 3Dee	0.32	0.52
Thymidylate synthase Extra Domain from 3Dee	0.32	0.52
Urease, gamma-subunit from SCOP	0.32	0.52
All beta
Barrel-sandwich hybrid from SCOP	0.65	0.89
Immunoglobulin-like beta-sandwich from SCOP	0.32	0.45
Single-stranded left-handed beta-helix Domain II from 3Dee	0.32	0.45
Type I DNA topoisomerase beta barrel domain from 3Dee	0.32	0.45
All alpha
4-helical cytokines from SCOP	3.24	4.93
4-helical cytokines Short chain from 3Dee	0.65	0.99
Acyl-CoA binding protein from 3Dee	0.32	0.49
Acyl-CoA dehydrogenase (flavoprotein), N-terminal domain from 3Dee	0.32	0.49
Anaphylotoxins (complement system) from SCOP	0.32	0.49
Annexin Domain from 3Dee	0.65	0.99
Anticodon-binding (C-terminal) domain of glutamyl-tRNA Domain II from 3Dee	0.32	0.49
Apolipophorin-III from SCOP	0.32	0.49
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin from SCOP	0.97	1.48
Citrate synthase Domain II from 3Dee	0.65	0.99
Cytochrome c from SCOP	2.91	4.43
DNA polymerase beta, N-terminal (8 kD)-domain from 3Dee	0.32	0.49
DNA-binding 3-helical bundle from 3Dee	4.85	7.39
Diphtheria toxin repressor (DtxR) dimerization domain from 3Dee	0.32	0.49
Disulphide-bond formation facilitator (DSBA), insertion domain from SCOP	0.32	0.49
Double-stranded beta-helix, helical domain from 3Dee	0.32	0.49
EF-hand from 3Dee	2.27	3.45
Endonuclease III from 3Dee	0.65	0.99
FIS protein from 3Dee	0.32	0.49
Ferritin like from 3Dee	0.97	1.48
Four-helical up-and-down bundle from SCOP	3.88	5.91
Globin-like from SCOP	2.27	3.45
Glutathione S-transferases, C-terminal domain from SCOP	0.65	0.99
HMG-box from SCOP	0.65	0.99
Heme-linked catalases C-terminal domain from 3Dee	0.32	0.49
Hemocyanin, N-terminal domain from SCOP	0.65	0.99
Hexokinase all helical domain from 3Dee	0.32	0.49
Histone-fold from SCOP	0.65	0.99
Immunoglobulin-binding protein A, fragment B from 3Dee	0.32	0.49
Long alpha-hairpin from SCOP	1.62	2.46
Lysin from SCOP	0.32	0.49
Met repressor-like from SCOP	0.97	1.48
Methane monooxygenase hydrolase, gamma subunit from 3Dee	0.32	0.49
Methionine synthase domain from 3Dee	0.32	0.49
Mu transposase, DNA-binding domain from 3Dee	0.32	0.49
Nucleotidyltransferases Domain III from 3Dee	0.32	0.49
Oligomers of long helices from 3Dee	1.29	1.97
P-loop containing nucleotide triphosphate hydrolases all helical domain from 3Dee	0.32	0.49
Phospholipase A2 from 3Dee	0.65	0.99
ROP protein from 3Dee	0.32	0.49
Restriction endonucleases helical domain from 3Dee	0.32	0.49
Retroviral matrix proteins from SCOP	0.32	0.49
Spectrin repeat unit from 3Dee	0.32	0.49
T4 endonuclease V from SCOP	0.32	0.49
Thermolysin-like metalloproteases, C-terminal domain from SCOP	0.65	0.99
Thymidine phosphorylase Domain I from 3Dee	0.32	0.49
Transducin (alpha subunit), insertion domain from SCOP	0.32	0.49
Trp repressor from SCOP	0.32	0.49
Tyrosyl-tRNA synthetase, middle domain from 3Dee	0.32	0.49
Uteroglobin-like from SCOP	0.32	0.49
Winged DNA binding like from 3Dee	0.32	0.49
lambda repressor-like DNA-binding domains from SCOP	2.59	3.94
p53 tetramerization domain from SCOP	0.32	0.49
small domain attached to TIM barrel from 3Dee	0.32	0.49
the C-terminal domain of RNA polymerase alpha subunit from 3Dee	0.32	0.49

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1hpcb-1	[seq. related domains]	All beta	Barrel-sandwich hybrid
2f3gb-1	[seq. related domains]	All beta	Barrel-sandwich hybrid
3grt-3	[seq. related domains]	Alpha and beta (a+b)	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1joa-3	[seq. related domains]	Alpha and beta (a+b)	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1garb-2	[seq. related domains]	Alpha and beta (a/b)	Glycinamide ribonucleotide transformylase Domain II
1dtn-1	[seq. related domains]	Alpha and beta (a+b)	N-terminal domain of enolase & muconate-lactonizing enzyme
2oneb-1	[seq. related domains]	Alpha and beta (a+b)	N-terminal domain of enolase & muconate-lactonizing enzyme
1mucb-1	[seq. related domains]	Alpha and beta (a+b)	N-terminal domain of enolase & muconate-lactonizing enzyme
1gtqb-1	[seq. related domains]	Alpha and beta (a+b)	Tetrahydrobiopterin biosynthesis enzymes
1ecl-3	[seq. related domains]	All beta	Type I DNA topoisomerase beta barrel domain
5aop-4	[seq. related domains]	undefined	undefined
1ytfc-2	[seq. related domains]	undefined	undefined
1fmtb-2	[seq. related domains]	undefined	undefined
1aiph-1	[seq. related domains]	undefined	undefined
2prp-1	[seq. related domains]	undefined	undefined
1poid-1	[seq. related domains]	undefined	undefined
1efud-1	[seq. related domains]	undefined	undefined
5aop-2	[seq. related domains]	undefined	undefined

Cluster 2

Descend tree into cluster 2

2gmfb-1	[seq. related domains]	All alpha	4-helical cytokines
1irl-1	[seq. related domains]	All alpha	4-helical cytokines
1rhgc-1	[seq. related domains]	All alpha	4-helical cytokines
1hik-1	[seq. related domains]	All alpha	4-helical cytokines
1au1b-1	[seq. related domains]	All alpha	4-helical cytokines
1hwga-1	[seq. related domains]	All alpha	4-helical cytokines
1lki-1	[seq. related domains]	All alpha	4-helical cytokines
1cnt4-1	[seq. related domains]	All alpha	4-helical cytokines
1hmcb-1	[seq. related domains]	All alpha	4-helical cytokines
2il6-1	[seq. related domains]	All alpha	4-helical cytokines
1hulb-2	[seq. related domains]	All alpha	4-helical cytokines Short chain
1vlk-1	[seq. related domains]	All alpha	4-helical cytokines Short chain
1qtqa-3	[seq. related domains]	Alpha and beta (a/b)	ATP pyrophosphatases extra domain
2abd-1	[seq. related domains]	All alpha	Acyl-CoA binding protein
1eged-1	[seq. related domains]	All alpha	Acyl-CoA dehydrogenase (flavoprotein), N-terminal domain
1cfaa-1	[seq. related domains]	All alpha	Anaphylotoxins (complement system)
1aeif-2	[seq. related domains]	All alpha	Annexin Domain
1aeif-3	[seq. related domains]	All alpha	Annexin Domain
1gln-4	[seq. related domains]	All alpha	Anticodon-binding (C-terminal) domain of glutamyl-tRNA Domain II
1aep-1	[seq. related domains]	All alpha	Apolipophorin-III
1a19b-1	[seq. related domains]	Alpha and beta (a/b)	Barstar (barnase inhibitor)
1hyp-1	[seq. related domains]	All alpha	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
1jtb-1	[seq. related domains]	All alpha	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
1hssd-1	[seq. related domains]	All alpha	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
1aj8b-2	[seq. related domains]	All alpha	Citrate synthase Domain II
3cts-2	[seq. related domains]	All alpha	Citrate synthase Domain II
1ab1-1	[seq. related domains]	Small proteins	Crambin-like
1gcb-2	[seq. related domains]	Alpha and beta (a+b)	Cysteine proteinases Domain II
1etpb-2	[seq. related domains]	All alpha	Cytochrome c
2mtac-1	[seq. related domains]	All alpha	Cytochrome c
2cxbb-1	[seq. related domains]	All alpha	Cytochrome c
1cor-1	[seq. related domains]	All alpha	Cytochrome c
2dvh-1	[seq. related domains]	All alpha	Cytochrome c
1cc5-1	[seq. related domains]	All alpha	Cytochrome c
1gks-1	[seq. related domains]	All alpha	Cytochrome c
1yic-1	[seq. related domains]	All alpha	Cytochrome c
1c6s-1	[seq. related domains]	All alpha	Cytochrome c
1bnp-1	[seq. related domains]	All alpha	DNA polymerase beta, N-terminal (8 kD)-domain
1hcra-1	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
1akha-2	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
1vnd-1	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
2cgpc-2	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
1a5j-1	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
1akha-1	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
1bib-1	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
2lfb-1	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
1pdnc-2	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
1hstb-1	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
1leb-1	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
1pdnc-1	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
1ret-1	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
2dtr-1	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
1hdp-1	[seq. related domains]	All alpha	DNA-binding 3-helical bundle
3hsf-1	[seq. related domains]	Alpha and beta (a/b)	DNA-binding winged domain
1awca-1	[seq. related domains]	Alpha and beta (a/b)	DNA-binding winged domain
1ktq-4	[seq. related domains]	Alpha and beta (a/b)	DNA/RNA polymerases Domain III
2dtr-2	[seq. related domains]	All alpha	Diphtheria toxin repressor (DtxR) dimerization domain
1acvb-2	[seq. related domains]	All alpha	Disulphide-bond formation facilitator (DSBA), insertion domain
2phlb-7	[seq. related domains]	All alpha	Double-stranded beta-helix, helical domain
1djzb-1	[seq. related domains]	All alpha	EF-hand
1jsa-2	[seq. related domains]	All alpha	EF-hand
1jsa-1	[seq. related domains]	All alpha	EF-hand
2mysa-4	[seq. related domains]	All alpha	EF-hand
1wdca-2	[seq. related domains]	All alpha	EF-hand
1ncz-1	[seq. related domains]	All alpha	EF-hand
5icb-1	[seq. related domains]	All alpha	EF-hand
2abk-2	[seq. related domains]	All alpha	Endonuclease III
2abk-1	[seq. related domains]	All alpha	Endonuclease III
1f36b-1	[seq. related domains]	All alpha	FIS protein
1ryt-1	[seq. related domains]	All alpha	Ferritin like
1bfrx-1	[seq. related domains]	All alpha	Ferritin like
2fha-1	[seq. related domains]	All alpha	Ferritin like
1eged-3	[seq. related domains]	All alpha	Four-helical up-and-down bundle
1hmdb-1	[seq. related domains]	All alpha	Four-helical up-and-down bundle
1lbid-3	[seq. related domains]	All alpha	Four-helical up-and-down bundle
1nfo-1	[seq. related domains]	All alpha	Four-helical up-and-down bundle
1jafb-1	[seq. related domains]	All alpha	Four-helical up-and-down bundle
1vls-1	[seq. related domains]	All alpha	Four-helical up-and-down bundle
1hr3b-1	[seq. related domains]	All alpha	Four-helical up-and-down bundle
256ba-1	[seq. related domains]	All alpha	Four-helical up-and-down bundle
1hr3c-1	[seq. related domains]	All alpha	Four-helical up-and-down bundle
1hr3a-1	[seq. related domains]	All alpha	Four-helical up-and-down bundle
1knyb-2	[seq. related domains]	All alpha	Four-helical up-and-down bundle
1rmva-1	[seq. related domains]	All alpha	Four-helical up-and-down bundle
1vhbb-1	[seq. related domains]	All alpha	Globin-like
1fslb-1	[seq. related domains]	All alpha	Globin-like
1a0zd-1	[seq. related domains]	All alpha	Globin-like
1allb-1	[seq. related domains]	All alpha	Globin-like
2hbg-1	[seq. related domains]	All alpha	Globin-like
1ash-1	[seq. related domains]	All alpha	Globin-like
2hbib-1	[seq. related domains]	All alpha	Globin-like
2nlla-1	[seq. related domains]	Small proteins	Glucocorticoid receptor-like (DNA-binding domain)
1gukb-2	[seq. related domains]	All alpha	Glutathione S-transferases, C-terminal domain
1gnwb-2	[seq. related domains]	All alpha	Glutathione S-transferases, C-terminal domain
1aab-1	[seq. related domains]	All alpha	HMG-box
1lefa-1	[seq. related domains]	All alpha	HMG-box
1ehs-1	[seq. related domains]	Small proteins	Heat-stable enterotoxin B
8cata-3	[seq. related domains]	All alpha	Heme-linked catalases C-terminal domain
1nol-1	[seq. related domains]	All alpha	Hemocyanin, N-terminal domain
1hc2-1	[seq. related domains]	All alpha	Hemocyanin, N-terminal domain
2yhx-1	[seq. related domains]	All alpha	Hexokinase all helical domain
1tafb-1	[seq. related domains]	All alpha	Histone-fold
1bfmb-1	[seq. related domains]	All alpha	Histone-fold
1spzz-1	[seq. related domains]	All alpha	Immunoglobulin-binding protein A, fragment B
3tf4b-1	[seq. related domains]	All beta	Immunoglobulin-like beta-sandwich
1sju-1	[seq. related domains]	Small proteins	Insulin-like
1ar5b-1	[seq. related domains]	All alpha	Long alpha-hairpin
1sesa-1	[seq. related domains]	All alpha	Long alpha-hairpin
1ktq-2	[seq. related domains]	All alpha	Long alpha-hairpin
1kfd-2	[seq. related domains]	All alpha	Long alpha-hairpin
1grj-1	[seq. related domains]	All alpha	Long alpha-hairpin
1lynb-1	[seq. related domains]	All alpha	Lysin
1lsg-1	[seq. related domains]	Alpha and beta (a+b)	Lysozyme-like Domain I
256l-1	[seq. related domains]	Alpha and beta (a+b)	Lysozyme-like Domain I
1brd-1	[seq. related domains]	Membrane and cell surface proteins and peptides	Membrane all-alpha
1bazd-1	[seq. related domains]	All alpha	Met repressor-like
1mntb-1	[seq. related domains]	All alpha	Met repressor-like
1mjlb-1	[seq. related domains]	All alpha	Met repressor-like
1mtyh-1	[seq. related domains]	All alpha	Methane monooxygenase hydrolase, gamma subunit
1bmtb-1	[seq. related domains]	All alpha	Methionine synthase domain
1tnt-1	[seq. related domains]	All alpha	Mu transposase, DNA-binding domain
2bpgb-3	[seq. related domains]	Alpha and beta (a+b)	Nucleotidyltransferases Domain II
1bpza-1	[seq. related domains]	All alpha	Nucleotidyltransferases Domain III
1afd3-1	[seq. related domains]	All alpha	Oligomers of long helices
1enva-1	[seq. related domains]	All alpha	Oligomers of long helices
1pyib-2	[seq. related domains]	All alpha	Oligomers of long helices
1d66b-2	[seq. related domains]	All alpha	Oligomers of long helices
1soo-2	[seq. related domains]	All alpha	P-loop containing nucleotide triphosphate hydrolases all helical domain
1poc-1	[seq. related domains]	All alpha	Phospholipase A2
1une-1	[seq. related domains]	All alpha	Phospholipase A2
1a06-1	[seq. related domains]	Alpha and beta (a+b)	Protein kinases (PK), catalytic core C terminal Domain
2csn-2	[seq. related domains]	Alpha and beta (a+b)	Protein kinases (PK), catalytic core C terminal Domain
1gtoa-1	[seq. related domains]	All alpha	ROP protein
1pvib-1	[seq. related domains]	All alpha	Restriction endonucleases helical domain
1hiws-1	[seq. related domains]	All alpha	Retroviral matrix proteins
1ifu-2	[seq. related domains]	Alpha and beta (a+b)	Ribosome inactivating proteins (RIP) Domain II
1bryz-2	[seq. related domains]	Alpha and beta (a+b)	Ribosome inactivating proteins (RIP) Domain II
1lxa-2	[seq. related domains]	All beta	Single-stranded left-handed beta-helix Domain II
2spcb-2	[seq. related domains]	All alpha	Spectrin repeat unit
1vasa-1	[seq. related domains]	All alpha	T4 endonuclease V
1aonn-2	[seq. related domains]	Alpha and beta (a+b)	The intermediate domain of GroEL
1trlb-1	[seq. related domains]	All alpha	Thermolysin-like metalloproteases, C-terminal domain
1tpt-1	[seq. related domains]	All alpha	Thymidine phosphorylase Domain I
1tsz-2	[seq. related domains]	Alpha and beta (a+b)	Thymidylate synthase Extra Domain
1ciy-1	[seq. related domains]	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains
1sgk-2	[seq. related domains]	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains
1colb-1	[seq. related domains]	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains
1as3-2	[seq. related domains]	All alpha	Transducin (alpha subunit), insertion domain
1bhb-1	[seq. related domains]	Peptides	Transmembrane helical fragments
1jhga-1	[seq. related domains]	All alpha	Trp repressor
3ts1-2	[seq. related domains]	All alpha	Tyrosyl-tRNA synthetase, middle domain
1a5oa-1	[seq. related domains]	Alpha and beta (a+b)	Urease, gamma-subunit
1utrb-1	[seq. related domains]	All alpha	Uteroglobin-like
1ecl-4	[seq. related domains]	All alpha	Winged DNA binding like
2rsla-1	[seq. related domains]	Alpha and beta (a/b)	gamma,delta Resolvase, large fragment
1uxd-1	[seq. related domains]	All alpha	lambda repressor-like DNA-binding domains
1adr-1	[seq. related domains]	All alpha	lambda repressor-like DNA-binding domains
1lmb4-1	[seq. related domains]	All alpha	lambda repressor-like DNA-binding domains
1ner-1	[seq. related domains]	All alpha	lambda repressor-like DNA-binding domains
2r63-1	[seq. related domains]	All alpha	lambda repressor-like DNA-binding domains
2puga-1	[seq. related domains]	All alpha	lambda repressor-like DNA-binding domains
1au7b-1	[seq. related domains]	All alpha	lambda repressor-like DNA-binding domains
1lbgd-5	[seq. related domains]	All alpha	lambda repressor-like DNA-binding domains
1a1uc-1	[seq. related domains]	All alpha	p53 tetramerization domain
1cec-2	[seq. related domains]	All alpha	small domain attached to TIM barrel
1coo-1	[seq. related domains]	All alpha	the C-terminal domain of RNA polymerase alpha subunit
1jsub-1	[seq. related domains]	undefined	undefined
1tc3c-1	[seq. related domains]	undefined	undefined
1a0p-1	[seq. related domains]	undefined	undefined
1occo-4	[seq. related domains]	undefined	undefined
1pnbb-1	[seq. related domains]	undefined	undefined
2orc-1	[seq. related domains]	undefined	undefined
1aa0-1	[seq. related domains]	undefined	undefined
1yub-2	[seq. related domains]	undefined	undefined
1delb-2	[seq. related domains]	undefined	undefined
1aa2-1	[seq. related domains]	undefined	undefined
1skyb-3	[seq. related domains]	undefined	undefined
1ignb-2	[seq. related domains]	undefined	undefined
1ycra-1	[seq. related domains]	undefined	undefined
1abv-1	[seq. related domains]	undefined	undefined
1af7-1	[seq. related domains]	undefined	undefined
1aup-1	[seq. related domains]	undefined	undefined
1xgo-2	[seq. related domains]	undefined	undefined
1alwb-1	[seq. related domains]	undefined	undefined
2fokb-1	[seq. related domains]	undefined	undefined
1vib-1	[seq. related domains]	undefined	undefined
4r1rc-1	[seq. related domains]	undefined	undefined
1sly-4	[seq. related domains]	undefined	undefined
1beo-1	[seq. related domains]	undefined	undefined
1dipb-1	[seq. related domains]	undefined	undefined
2ppsl-1	[seq. related domains]	undefined	undefined
1e2ac-1	[seq. related domains]	undefined	undefined
1lre-1	[seq. related domains]	undefined	undefined
1vhrb-1	[seq. related domains]	undefined	undefined
2hp8-1	[seq. related domains]	undefined	undefined
1aoy-1	[seq. related domains]	undefined	undefined
1bax-1	[seq. related domains]	undefined	undefined
1aisb-2	[seq. related domains]	undefined	undefined
1taq-2	[seq. related domains]	undefined	undefined
1jud-2	[seq. related domains]	undefined	undefined
1ddf-1	[seq. related domains]	undefined	undefined
1tdtc-1	[seq. related domains]	undefined	undefined
1fzbd-1	[seq. related domains]	undefined	undefined
1mnmb-1	[seq. related domains]	undefined	undefined
1klmb-3	[seq. related domains]	undefined	undefined
1foy-1	[seq. related domains]	undefined	undefined
1aikn-1	[seq. related domains]	undefined	undefined
1gtpc-3	[seq. related domains]	undefined	undefined
1fts-1	[seq. related domains]	undefined	undefined
2hfh-1	[seq. related domains]	undefined	undefined
1agrh-1	[seq. related domains]	undefined	undefined
1aoa-1	[seq. related domains]	undefined	undefined
1a17-1	[seq. related domains]	undefined	undefined
1chkb-2	[seq. related domains]	undefined	undefined
1nirb-1	[seq. related domains]	undefined	undefined
2trcp-1	[seq. related domains]	undefined	undefined
1ihp-2	[seq. related domains]	undefined	undefined
1sly-2	[seq. related domains]	undefined	undefined
1fgjb-2	[seq. related domains]	undefined	undefined
1higb-2	[seq. related domains]	undefined	undefined
2ezi-1	[seq. related domains]	undefined	undefined
1nkl-1	[seq. related domains]	undefined	undefined
1sly-3	[seq. related domains]	undefined	undefined
1vdfe-1	[seq. related domains]	undefined	undefined
1occu-1	[seq. related domains]	undefined	undefined
1tbgh-1	[seq. related domains]	undefined	undefined
2fokb-2	[seq. related domains]	undefined	undefined
1iba-1	[seq. related domains]	undefined	undefined
1afob-1	[seq. related domains]	undefined	undefined
1sfe-2	[seq. related domains]	undefined	undefined
1aq5c-1	[seq. related domains]	undefined	undefined
1al04-1	[seq. related domains]	undefined	undefined
1bgw-4	[seq. related domains]	undefined	undefined
1if1b-1	[seq. related domains]	undefined	undefined
2fokb-3	[seq. related domains]	undefined	undefined
1efrg-1	[seq. related domains]	undefined	undefined
1unkd-1	[seq. related domains]	undefined	undefined
1jkw-1	[seq. related domains]	undefined	undefined
1cuk-2	[seq. related domains]	undefined	undefined
2ezl-1	[seq. related domains]	undefined	undefined
2a0b-1	[seq. related domains]	undefined	undefined
2pax-1	[seq. related domains]	undefined	undefined
1exnb-2	[seq. related domains]	undefined	undefined
1ajyb-2	[seq. related domains]	undefined	undefined
1aum-1	[seq. related domains]	undefined	undefined
1opc-1	[seq. related domains]	undefined	undefined
1pmi-2	[seq. related domains]	undefined	undefined
1wq1g-2	[seq. related domains]	undefined	undefined
1ngr-1	[seq. related domains]	undefined	undefined
2fusb-1	[seq. related domains]	undefined	undefined
1aa7b-1	[seq. related domains]	undefined	undefined
1ahjh-1	[seq. related domains]	undefined	undefined
1a68-1	[seq. related domains]	undefined	undefined
2fusb-2	[seq. related domains]	undefined	undefined
1ns1b-1	[seq. related domains]	undefined	undefined
1lbeb-1	[seq. related domains]	undefined	undefined
2trt-1	[seq. related domains]	undefined	undefined
1ab3-1	[seq. related domains]	undefined	undefined
1fohd-3	[seq. related domains]	undefined	undefined
1ak4d-1	[seq. related domains]	undefined	undefined
1maz-1	[seq. related domains]	undefined	undefined
1crkd-1	[seq. related domains]	undefined	undefined
1ytfc-1	[seq. related domains]	undefined	undefined
1huib-1	[seq. related domains]	undefined	undefined
1nsgb-1	[seq. related domains]	undefined	undefined
1rss-1	[seq. related domains]	undefined	undefined
1jkw-2	[seq. related domains]	undefined	undefined
1chkb-1	[seq. related domains]	undefined	undefined
1c52-1	[seq. related domains]	undefined	undefined
1uor-2	[seq. related domains]	undefined	undefined
1skye-3	[seq. related domains]	undefined	undefined
1gnd-2	[seq. related domains]	undefined	undefined
1ignb-1	[seq. related domains]	undefined	undefined
2fusb-3	[seq. related domains]	undefined	undefined
1wjdb-1	[seq. related domains]	undefined	undefined
2pil-1	[seq. related domains]	undefined	undefined
1aoa-2	[seq. related domains]	undefined	undefined
1ezd-2	[seq. related domains]	undefined	undefined
1jli-1	[seq. related domains]	undefined	undefined
1a5t-2	[seq. related domains]	undefined	undefined
1jsub-2	[seq. related domains]	undefined	undefined
2af8-1	[seq. related domains]	undefined	undefined
1sknp-1	[seq. related domains]	undefined	undefined
1gtoc-1	[seq. related domains]	undefined	undefined

Cluster 3

Descend tree into cluster 3

1bryz-1	[seq. related domains]	Alpha and beta (a+b)	Ribosome inactivating proteins (RIP) Domain I
1jdbk-3	[seq. related domains]	undefined	undefined
1fua-1	[seq. related domains]	undefined	undefined

Cluster 4

Descend tree into cluster 4

1wq1g-1	[seq. related domains]	undefined	undefined
1qnf-2	[seq. related domains]	undefined	undefined

Cluster 5

Descend tree into cluster 5

1esp-2	[seq. related domains]	All alpha	Thermolysin-like metalloproteases, C-terminal domain
1jvr-1	[seq. related domains]	undefined	undefined

---

Enter PDB code - optionally suffixing the code with the chain id.

---

3dee@compbio.dundee.ac.uk