3 Dee - Database of Protein Domain Definitions

[Search] [HELP]

The current cluster is formed at a score of 0.543

Ascend tree (bring in more domains)

Classes% of representative set
undefined 16.67
All alpha 83.33
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 16.67 0.16
All alpha
Aldehyde ferredoxin oxidoreductase, middle domain from 3Dee 16.67 0.49
EF-hand from 3Dee 33.33 0.99
Heme-dependent peroxidases Domain I from 3Dee 33.33 0.99

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1aorb-2 [seq. related domains] All alpha Aldehyde ferredoxin oxidoreductase, middle domain
2scpb-1 [seq. related domains] All alpha EF-hand
1bmob-1 [seq. related domains] All alpha EF-hand

Cluster 2

Descend tree into cluster 2

1ccj-1 [seq. related domains] All alpha Heme-dependent peroxidases Domain I
1mn2-1 [seq. related domains] All alpha Heme-dependent peroxidases Domain I
1atjf-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

3dee@compbio.dundee.ac.uk