3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 1.126

Ascend tree (bring in more domains)

Classes% of representative set
undefined 60.00
Small proteins 20.00
Peptides 20.00
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 60.00 0.47
Small proteins
HIV zinc finger-like domains from 3Dee 20.00 0.87
Peptides
Alzheimer's disease amyloid peptides from 3Dee 20.00 2.04

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1mfs-1 [seq. related domains] Small proteins HIV zinc finger-like domains

Cluster 1

Descend tree into cluster 1

1aml-1 [seq. related domains] Peptides Alzheimer's disease amyloid peptides
1yuja-1 [seq. related domains] undefined undefined
2glia-3 [seq. related domains] undefined undefined
2ppsk-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

3dee@compbio.dundee.ac.uk