3 Dee - Database of Protein Domain Definitions


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The current cluster is formed at a score of 2.756

Ascend tree (bring in more domains)

Classes% of representative set
undefined 28.57
Peptides 57.14
All alpha 14.29
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 28.57 0.31
Peptides
Pancreatic polypeptide from 3Dee 14.29 2.04
Polymorphic antigen SPAM-H1 (residues 90-127) from 3Dee 14.29 2.04
Transmembrane helical fragments from 3Dee 28.57 4.08
All alpha
Oligomers of long helices from 3Dee 14.29 0.49

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1zto-1 [seq. related domains] undefined undefined

Cluster 1

Descend tree into cluster 1

1fdm-1 [seq. related domains] All alpha Oligomers of long helices
1ron-1 [seq. related domains] Peptides Pancreatic polypeptide
1psm-1 [seq. related domains] Peptides Polymorphic antigen SPAM-H1 (residues 90-127)
1spf-1 [seq. related domains] Peptides Transmembrane helical fragments
1peh-1 [seq. related domains] Peptides Transmembrane helical fragments
1opp-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.


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