3 Dee - Database of Protein Domain Definitions


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The current cluster is formed at a score of 2.662

Ascend tree (bring in more domains)

Classes% of representative set
undefined 41.67
All beta 50.00
All alpha 8.33
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 41.67 0.79
All beta
Common fold of diphtheria toxin/transcription factors/cytochrome f from SCOP 16.67 0.89
Tumor necrosis factor from 3Dee 16.67 0.89
Viral coat and capsid proteins from SCOP 16.67 0.89
All alpha
Glycosyltransferases of the superhelical fold Domain II from 3Dee 8.33 0.49

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1ahm-1 [seq. related domains] undefined undefined

Cluster 1

Descend tree into cluster 1

1sgk-3 [seq. related domains] All beta Common fold of diphtheria toxin/transcription factors/cytochrome f
2pcfb-1 [seq. related domains] All beta Common fold of diphtheria toxin/transcription factors/cytochrome f
3tf4b-3 [seq. related domains] All alpha Glycosyltransferases of the superhelical fold Domain II
1aly-1 [seq. related domains] All beta Tumor necrosis factor
1a8mc-1 [seq. related domains] All beta Tumor necrosis factor
1al0g-1 [seq. related domains] All beta Viral coat and capsid proteins
2tbvc-2 [seq. related domains] All beta Viral coat and capsid proteins
1sfp-1 [seq. related domains] undefined undefined
1nbcb-1 [seq. related domains] undefined undefined
1amx-1 [seq. related domains] undefined undefined
1anu-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.


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