compbio.data.sequence

Class AlignmentMetadata

java.lang.Object

compbio.data.sequence.AlignmentMetadata

@Immutable
public class AlignmentMetadata
extends java.lang.Object

Alignment metadata e.g. method/program being used to generate the alignment and its parameters

Version:

1.0 September 2009

Author:

pvtroshin

Field Summary

Fields

Modifier and Type	Field and Description
private char	gapchar
private Program	program

Constructor Summary

Constructors

Modifier	Constructor and Description
private	AlignmentMetadata()
	AlignmentMetadata(Program program, char gapchar)

Method Summary

Modifier and Type	Method and Description
boolean	equals(java.lang.Object obj)
char	getGapchar()
Program	getProgram()
int	hashCode()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Field Detail

program

private Program program

gapchar

private char gapchar

Constructor Detail

AlignmentMetadata

private AlignmentMetadata()

AlignmentMetadata

public AlignmentMetadata(Program program,
                         char gapchar)

Method Detail

getProgram

public Program getProgram()

getGapchar

public char getGapchar()

equals

public boolean equals(java.lang.Object obj)

Overrides:

equals in class java.lang.Object

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object