Directory src/jalview/ws/

Directory Created:
2005-01-15 15:12
Total Files:
11
Deleted Files:
17
Lines of Code:
1502

[root]/src/jalview/ws
                 dbsources (12 files, 297 lines)
                     das (1 files, 0 lines)
                 ebi (1 files, 0 lines)
                 jws1 (10 files, 3749 lines)
                 jws2 (9 files, 2594 lines)
                     dm (4 files, 342 lines)
                 params (7 files, 233 lines)
                 seqfetcher (3 files, 0 lines)

Lines of Code

src/jalview/ws/ Lines of Code

Developers

Author Changes Lines of Code Lines per Change
Totals 295 (100.0%) 8199 (100.0%) 27.7
jimp 77 (26.1%) 3751 (45.7%) 48.7
jprocter 147 (49.8%) 2444 (29.8%) 16.6
andrew 66 (22.4%) 2004 (24.4%) 30.3
amwaterhouse 5 (1.7%) 0 (0.0%) 0.0

Most Recent Commits

jprocter 2010-09-10 16:21

early bail out for long urls, and threaded off group url construction: JAL-402

36 lines of code changed in:

  • src/jalview/ws: EnfinEnvision2OneWay.java (+36 -6)
jprocter 2010-09-09 16:33

wrap tooltips and revise layout (JAL-644)

60 lines of code changed in:

  • src/jalview/ws: EnfinEnvision2OneWay.java (+60 -28)
jprocter 2010-05-21 11:07

comment about trapping OOMs

11 lines of code changed in:

  • src/jalview/ws: JobStateSummary.java (+11 -2)
jprocter 2010-05-17 17:12

refactored old jalview service code to its own package.

1 lines of code changed in:

  • src/jalview/ws: AWSThread.java (+1), Discoverer.java (del), JPredClient.java (del), JPredThread.java (del), JWS1Thread.java (del), MsaWSClient.java (del), MsaWSThread.java (del), SeqSearchWSClient.java (del), SeqSearchWSThread.java (del), WS1Client.java (del), WSJob.java (del)
jprocter 2010-05-17 11:17

always pass full web service exception details to the log

2 lines of code changed in:

  • src/jalview/ws: AWSThread.java (+2 -1)
jprocter 2010-05-17 10:56

always pass full web service exception details to the log

2 lines of code changed in:

  • src/jalview/ws: AWSThread.java (+2 -5)
jprocter 2010-05-14 18:08

First patch for * JAL-493

679 lines of code changed in:

  • src/jalview/ws: AWSThread.java (new 344), AWsJob.java (new 200), Discoverer.java (+2 -2), JPredClient.java (+1 -1), JPredThread.java (changed), JWS1Thread.java (new), JobStateSummary.java (new 129), MsaWSClient.java (+2 -2), MsaWSThread.java (changed), SeqSearchWSClient.java (changed), SeqSearchWSThread.java (changed), WS1Client.java (new), WSClient.java (+1 -85), WSJob.java (new), WSThread.java (del)
jprocter 2010-04-30 10:29

jalview 2.5 release banner

420 lines of code changed in:

  • src/jalview/ws: DBRefFetcher.java (changed), DasSequenceFeatureFetcher.java (changed), Discoverer.java (+26 -26), EnfinEnvision2OneWay.java (+304 -185), JPredClient.java (+23 -24), JPredThread.java (changed), MsaWSClient.java (+19 -20), MsaWSThread.java (changed), SeqSearchWSClient.java (changed), SeqSearchWSThread.java (changed), SequenceFetcher.java (changed), WSClient.java (+19 -22), WSClientI.java (+12 -13), WSMenuEntryProviderI.java (+17), WSThread.java (changed)
jprocter 2010-04-02 11:35

indicate the database id source associated with the sequences being submitted.

1 lines of code changed in:

  • src/jalview/ws: EnfinEnvision2OneWay.java (+1 -1)
jprocter 2010-04-01 17:30

prevent duplicate service submission links

10 lines of code changed in:

  • src/jalview/ws: EnfinEnvision2OneWay.java (+10)
jprocter 2010-04-01 17:05

reinstate submission of database Ids as well as sequence Id strings.

37 lines of code changed in:

  • src/jalview/ws: EnfinEnvision2OneWay.java (+37 -29)
jprocter 2010-04-01 15:19

refactored copy of groupURL mechanism into new Envision service discovery class.

462 lines of code changed in:

  • src/jalview/ws: EnfinEnvision2OneWay.java (new 462)
jprocter 2010-04-01 15:18

new interface

20 lines of code changed in:

  • src/jalview/ws: WSClient.java (+1 -1), WSMenuEntryProviderI.java (new 19)
jprocter 2010-03-26 12:18

indicate which registry timed out.

0 lines of code changed in:

  • src/jalview/ws: DasSequenceFeatureFetcher.java (changed)
jprocter 2010-03-11 17:18

warning for unresolvable database source strings (or ones which apparently have no cross references)

0 lines of code changed in:

  • src/jalview/ws: DBRefFetcher.java (changed)
jprocter 2010-02-10 14:46

only need to remove progress bar if fetch wasn't cancelled (bug #0059977)

0 lines of code changed in:

  • src/jalview/ws: DasSequenceFeatureFetcher.java (changed)
jprocter 2009-06-24 09:28

all alignment sequences associated with a dataset sequence must have start-end updated (and any mappings adjusted - see TODO)

0 lines of code changed in:

  • src/jalview/ws: DBRefFetcher.java (changed)
jprocter 2009-06-19 11:01

bugfix mapped reference transfer and made picr ID retrieval optional

0 lines of code changed in:

  • src/jalview/ws: DBRefFetcher.java (changed)
jprocter 2009-06-12 16:46

reinstated blind querying of datasources. Transfer references to alignment from Map.To sequences on retrieved entries (e.g. protein product from EMBLCDS record)

0 lines of code changed in:

  • src/jalview/ws: DBRefFetcher.java (changed)
jprocter 2009-06-08 12:20

*experimental use of picr* apply gpl development license

0 lines of code changed in:

  • src/jalview/ws: DBRefFetcher.java (changed)

(126 more)

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