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Evidence of Interaction Between SNRPG and UBAP2

The interaction score between SNRPG and UBAP2 is 1.06.

This page provides the details about the evidence that was used to calculate the interaction Score between the two proteins

The Scores that are listed with each module are based on the interaction score where that module provides the only source of evidence. The final Score is the integration of all the sources of evidence.

FeatureEvidenceScore (?)
Gene Expression

Pearson's Correlation between SNRPG and UBAP2 = 0.63

The original expression data was collated from the NCBI GEO database. For further information about this dataset please refer to the NCBI GEO dataset GDS596.

 7.78E-3
Orthology N/A N/A
Domains No domains were used in calculating likelihood of interaction 1.48E-3
Post-translational Modifications

Protein: SNRPG

PTMResidueReference

Protein: UBAP2

PTMResidueReference
Phosphorylation 839 PubMed, HPRD
Phosphorylation 840 PubMed, HPRD
Localisation

Protein: SNRPG

LocalisationReference
Nucleus HPRD
Cytoplasm HPRD

Protein: UBAP2

No localisation data was used in calculating likelihood of interaction
Transitive Score

The common interactors between SNRPG and UBAP2 that are considered by the Transitive module are listed below.

The Scores listed are the values used by the transitive module to calculate the final interaction Score between SNRPG andUBAP2. The values listed are therefore not the final Score value for the listed interactions.

With a Score value ≥0.025 , SNRPG has 256 interactors and UBAP2 has 1107 interactors of which there are 54 common interactors.

Common InteractorName of Common InteractorScore for SNRPG-Interactor (?)Score for UBAP2-Interactor (?)
SNRPD1 SNRPD1: Small nuclear ribonucleoprotein Sm D1 2.07E3 0.087
SNRPD3 SNRPD3: Small nuclear ribonucleoprotein Sm D3 2.07E3 0.087
KIAA0788 ASCC3L1, HELIC2, KIAA0788: U5 small nuclear ribonucleoprotein 200 kDa helicase 32.60 0.087
LSM2 LSM2, C6orf28, G7b: U6 snRNA-associated Sm-like protein LSm2 1.22 0.087
SF3B1 SF3B1, SAP155: Splicing factor 3B subunit 1 0.890 0.0425
SNRP70 SNRP70, RNPU1Z, RPU1, U1AP1: U1 small nuclear ribonucleoprotein 70 kDa 0.657 0.052
PLK1 PLK1, PLK: Serine/threonine-protein kinase PLK1 0.354 0.028
DDX21 DDX21: Nucleolar RNA helicase 2 0.293 0.070
SMARCA5 SMARCA5, SNF2H, WCRF135: SWI/SNF-related matrix-associated actin-dependent regul 0.263 0.070
CDC20 CDC20: Cell division cycle protein 20 homolog 0.263 0.087
GNB2L1 Lung cancer oncogene 7 0.137 0.070
CHD4 CHD4: Chromodomain-helicase-DNA-binding protein 4 0.137 0.087
DDX46 DDX46, KIAA0801: Probable ATP-dependent RNA helicase DDX46 0.137 0.070
PAK1IP1 PAK1IP1, PIP1, WDR84: p21-activated protein kinase-interacting protein 1 0.123 0.052
CHAF1B CHAF1B, CAF1A, CAF1P60, MPHOSPH7, MPP7: Chromatin assembly factor 1 subunit B 0.123 0.070
CSTF1 CSTF1: Cleavage stimulation factor 50 kDa subunit 0.123 0.087
CGI-48 UTP18, WDR50, CDABP0061, CGI-48: U3 small nucleolar RNA-associated protein 18 ho 0.123 0.144
EIF3S2 EIF3S2, TRIP1: Eukaryotic translation initiation factor 3 subunit 2 0.123 0.070
IEF-SSP-9502 PWP1: Periodic tryptophan protein 1 homolog 0.123 0.070
SND1 SND1, TDRD11: Staphylococcal nuclease domain-containing protein 1 0.123 0.070
SMARCA4 SMARCA4, BRG1, SNF2B, SNF2L4: Probable global transcription activator SNF2L4 0.083 0.144
DDX41 DDX41, ABS: Probable ATP-dependent RNA helicase DDX41 0.074 0.070
BLM BLM, RECQ2, RECQL3: Bloom syndrome protein 0.074 0.070
WRN WRN, RECQ3, RECQL2: Werner syndrome ATP-dependent helicase 0.074 0.070
CORO1C CORO1C, CRNN4: Coronin-1C 0.074 0.032
SEC31L1 N/A 0.074 0.0425
DDX3X DDX3X, DBX, DDX3: ATP-dependent RNA helicase DDX3X 0.074 0.0425
BTAF1 BTAF1, TAF172: TATA-binding protein-associated factor 172 0.074 0.070
COPB2 COPB2: Coatomer subunit beta' 0.074 0.052
COPA COPA: Coatomer subunit alpha 0.074 0.032
PA2G4 PA2G4, EBP1: Proliferation-associated protein 2G4 0.0739 0.025
WDR1 N/A 0.067 0.0425
DHX16 DHX16, DBP2, DDX16, KIAA0577: Putative pre-mRNA-splicing factor ATP-dependent RN 0.060 0.070
WDHD1 WDHD1, AND1: WD repeat and HMG-box DNA-binding protein 1 0.060 0.0425
REXO2 REXO2, SFN, CGI-114, SMFN: Oligoribonuclease, mitochondrial precursor 0.060 0.070
ARPC1B ARC41, ARPC1B: Actin-related protein 2/3 complex subunit 1B 0.044 0.032
GNB1 GNB1: Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 0.044 0.0425
GNB2 GNB2: Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 0.044 0.0425
DDX5 DDX5, G17P1, HELR, HLR1: Probable ATP-dependent RNA helicase DDX5 0.044 0.0425
HIRA HIRA, DGCR1, HIR, TUPLE1: Protein HIRA 0.044 0.052
SMARCA3 HLTF, HIP116A, RNF80, SMARCA3, SNF2L3, ZBU1: Helicase-like transcription factor 0.044 0.070
DICER1 DICER1, DICER, HERNA, KIAA0928: Endoribonuclease Dicer 0.044 0.032
ERCC3 ERCC3, XPB, XPBC: TFIIH basal transcription factor complex helicase XPB subunit 0.044 0.0425
SKIV2L SKIV2L, XXbac-BCX116I9.5-001, XXbac-BPG116M5.1-001: Superkiller viralicidic acti 0.044 0.070
EIF2S1 EIF2S1, EIF2A: Eukaryotic translation initiation factor 2 subunit 1 0.044 0.087
SSRP1 SSRP1, FACT80: FACT complex subunit SSRP1 0.044 0.087
DDX24 DDX24: ATP-dependent RNA helicase DDX24 0.036 0.032
BCDO2 PTS: 6-pyruvoyl tetrahydrobiopterin synthase 0.036 0.026
DDX3Y DDX3Y, DBY: ATP-dependent RNA helicase DDX3Y 0.036 0.070
NUP214 N/A 0.0308 0.026
BRIP1 BRIP1, BACH1, FANCJ: Fanconi anemia group J protein 0.028 0.026
WDR54 N/A 0.027 0.028
TLE3 TLE3, KIAA1547: Transducin-like enhancer protein 3 0.027 0.028
SMARCAD1 SMARCAD1, KIAA1122: SWI/SNF-related matrix-associated actin-dependent regulator 0.027 0.028
0.572
Total Score 1.06