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The Barton Group

Predicted interactions involving protein LSM6: U6 snRNA-associated Sm-like protein LSm6 (IPI00001146) that score above 0.125

Click on the protein name for more information about the protein.

The Score column is the predicted score of interaction between the two proteins

Click on the Evidence link to view a breakdown of the information about the predicted interaction.

Key
Module ScoreDatabases
Where interaction is observed in another database a link is provided:

Protein 1 (?)Protein 2 (?) Name of Protein 2 Module Scores (?) Scores (?) Evidence (?) Database (?)
LSM6 LSM5 LSM5: U6 snRNA-associated Sm-like protein LSm5 3.76E5 Evidence O
LSM6 SNRPD3 SNRPD3: Small nuclear ribonucleoprotein Sm D3 1.58E5 Evidence
LSM6 LSM7 LSM7: U6 snRNA-associated Sm-like protein LSm7 7.41E4 Evidence O
LSM6 LSM4 LSM4: U6 snRNA-associated Sm-like protein LSm4 7.41E4 Evidence O
LSM6 LSM3 LSM3, MDS017: U6 snRNA-associated Sm-like protein LSm3 7.41E4 Evidence O
LSM6 SNRPD2 SNRPD2, SNRPD1: Small nuclear ribonucleoprotein Sm D2 7.41E4 Evidence
LSM6 LSM2 LSM2, C6orf28, G7b: U6 snRNA-associated Sm-like protein LSm2 7.41E4 Evidence O
LSM6 LSM1 LSM1, CASM: U6 snRNA-associated Sm-like protein LSm1 3.61E4 Evidence O
LSM6 SNRPE SNRPE: Small nuclear ribonucleoprotein E 666.0 Evidence
LSM6 LSM8 LSM8: U6 snRNA-associated Sm-like protein LSm8 597.0 Evidence O
LSM6 SNRPD1 SNRPD1: Small nuclear ribonucleoprotein Sm D1 279.0 Evidence
LSM6 SNRPF SNRPF, PBSCF: Small nuclear ribonucleoprotein F 279.0 Evidence
LSM6 XRN1 XRN1, SEP1: 5'-3' exoribonuclease 1 81.00 Evidence
LSM6 LSM10 LSM10: U7 snRNA-associated Sm-like protein LSm10 54.20 Evidence
LSM6 PRPF4 PRPF4, PRP4: U4/U6 small nuclear ribonucleoprotein Prp4 28.20 Evidence
LSM6 KIAA0788 ASCC3L1, HELIC2, KIAA0788: U5 small nuclear ribonucleoprotein 200 kDa helicase 28.20 Evidence
LSM6 RBBP4 RBBP4, RBAP48: Histone-binding protein RBBP4 28.2 Evidence
LSM6 WDR3 WDR3: WD repeat-containing protein 3 28.2 Evidence
LSM6 WDR68 WDR68, HAN11: WD repeat-containing protein 68 28.2 Evidence
LSM6 TSSC1 TSSC1: Protein TSSC1 28.2 Evidence
LSM6 PRP19 PRPF19, NMP200, PRP19, SNEV: Pre-mRNA-processing factor 19 22.20 Evidence
LSM6 WDR8 WDR8: WD repeat-containing protein 8 19.00 Evidence
LSM6 WDR77 WDR77, HKMT1069, hCG_39991: Androgen receptor cofactor p44 17.00 Evidence
LSM6 ARPC1B ARC41, ARPC1B: Actin-related protein 2/3 complex subunit 1B 17.00 Evidence
LSM6 COPA COPA: Coatomer subunit alpha 13.70 Evidence
LSM6 GNB2L1 Lung cancer oncogene 7 12.50 Evidence
LSM6 RAD54B RAD54B: DNA repair and recombination protein RAD54B 11.30 Evidence
LSM6 ISG20 ISG20, HEM45: Interferon-stimulated gene 20 kDa protein 11.30 Evidence
LSM6 DHX16 DHX16, DBP2, DDX16, KIAA0577: Putative pre-mRNA-splicing factor ATP-dependent RN 11.20 Evidence
LSM6 REV3L REV3L, POLZ, REV3: DNA polymerase zeta catalytic subunit 9.29 Evidence
LSM6 CORO1B CORO1B: Coronin-1B 8.32 Evidence
LSM6 RFWD2 RFWD2, COP1, RNF200: E3 ubiquitin-protein ligase RFWD2 6.11 Evidence
LSM6 TLE6 TLE6: Transducin-like enhancer protein 6 6.11 Evidence
LSM6 TDRD4 TDRD4: Tudor domain-containing protein 4 6.11 Evidence
LSM6 EXOSC8 EXOSC8, OIP2, RRP43: Exosome complex exonuclease RRP43 6.09 Evidence
LSM6 WDR18 N/A 5.47 Evidence
LSM6 SMN2 SMN1, SMN, SMN2, SMNC, SMNT: Survival motor neuron protein 5.47 Evidence
LSM6 PTGES3 PTGES3, P23, TEBP: Prostaglandin E synthase 3 2.94 Evidence
LSM6 SART1 SART1: U4/U6.U5 tri-snRNP-associated protein 1 2.64 Evidence
LSM6 SNRPB SNRPB, COD, SNRPB1: Small nuclear ribonucleoprotein-associated proteins B and B' 2.52 Evidence
LSM6 PRPF31 PRPF31, PRP31: U4/U6 small nuclear ribonucleoprotein Prp31 1.82 Evidence
LSM6 E2IG3 N/A 1.78 Evidence
LSM6 HMGN2 HMGN2, HMG17: Non-histone chromosomal protein HMG-17 1.75 Evidence
LSM6 PRPF3 PRPF3, HPRP3, PRP3: U4/U6 small nuclear ribonucleoprotein Prp3 1.6 Evidence
LSM6 PRPF8 PRPF8, PRPC8: Pre-mRNA-processing-splicing factor 8 1.6 Evidence
LSM6 TXNL4A TXNL4A, DIM1, TXNL4: Thioredoxin-like protein 4A 1.57 Evidence
LSM6 SF3B3 N/A 1.57 Evidence
LSM6 EIF3S9 EIF3S9: Eukaryotic translation initiation factor 3 subunit 9 1.57 Evidence
LSM6 SNRPG SNRPG, PBSCG: Small nuclear ribonucleoprotein G 1.05 Evidence
LSM6 PRPF6 PRPF6, C20orf14: Pre-mRNA-processing factor 6 0.955 Evidence
LSM6 PIP5K3 PIP5K3, KIAA0981, PIKFYVE: FYVE finger-containing phosphoinositide kinase 0.953 Evidence
LSM6 SLC43A1 SLC43A1, LAT3, PB39, POV1: Large neutral amino acids transporter small subunit 3 0.902 Evidence
LSM6 PPARBP N/A 0.875 Evidence
LSM6 MLH1 MLH1, COCA2: DNA mismatch repair protein Mlh1 0.875 Evidence
LSM6 TOP2A TOP2A, TOP2: DNA topoisomerase 2-alpha 0.858 Evidence
LSM6 CHEK1 CHEK1, CHK1: Serine/threonine-protein kinase Chk1 0.77 Evidence
LSM6 HGS HGS, HRS: Hepatocyte growth factor-regulated tyrosine kinase substrate 0.77 Evidence
LSM6 TCEA1 TCEA1, GTF2S, TFIIS: Transcription elongation factor A protein 1 0.71 Evidence
LSM6 FLJ36874 N/A 0.593 Evidence
LSM6 DEADC1 ADAT2, DEADC1: tRNA-specific adenosine deaminase 2 0.512 Evidence
LSM6 LOC400987 N/A 0.512 Evidence
LSM6 DCP1A DCP1A, SMIF: mRNA-decapping enzyme 1A 0.427 Evidence
LSM6 MECP2 MECP2: Methyl-CpG-binding protein 2 0.395 Evidence
LSM6 SLC43A3 SLC43A3, PSEC0252: Solute carrier family 43 member 3 0.323 Evidence
LSM6 CCNT2 CCNT2: Cyclin-T2 0.305 Evidence
LSM6 ZNF174 ZNF174, ZSCAN8: Zinc finger protein 174 0.305 Evidence
LSM6 GTF3C2 GTF3C2, KIAA0011: General transcription factor 3C polypeptide 2 0.292 Evidence
LSM6 DHX15 DHX15, DBP1, DDX15: Putative pre-mRNA-splicing factor ATP-dependent RNA helicase 0.255 Evidence
LSM6 DDX6 N/A 0.235 Evidence
LSM6 BAT1 N/A 0.228 Evidence
LSM6 LSM11 LSM11: U7 snRNA-associated Sm-like protein LSm11 0.205 Evidence