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The Barton Group

Predicted interactions involving protein LSM4: U6 snRNA-associated Sm-like protein LSm4 (IPI00294955) that score above 1.0

Click on the protein name for more information about the protein.

The Score column is the predicted score of interaction between the two proteins

Click on the Evidence link to view a breakdown of the information about the predicted interaction.

Key
Module ScoreDatabases
Where interaction is observed in another database a link is provided:

Protein 1 (?)Protein 2 (?) Name of Protein 2 Module Scores (?) Scores (?) Evidence (?) Database (?)
LSM4 LSM7 LSM7: U6 snRNA-associated Sm-like protein LSm7 3.76E5 Evidence O
LSM4 LSM1 LSM1, CASM: U6 snRNA-associated Sm-like protein LSm1 1.83E5 Evidence O
LSM4 LSM2 LSM2, C6orf28, G7b: U6 snRNA-associated Sm-like protein LSm2 1.58E5 Evidence O
LSM4 SNRPG SNRPG, PBSCG: Small nuclear ribonucleoprotein G 8.25E4 Evidence
LSM4 LSM6 LSM6: U6 snRNA-associated Sm-like protein LSm6 7.41E4 Evidence O
LSM4 SNRPD2 SNRPD2, SNRPD1: Small nuclear ribonucleoprotein Sm D2 7.41E4 Evidence
LSM4 LSM5 LSM5: U6 snRNA-associated Sm-like protein LSm5 7.41E4 Evidence O
LSM4 SNRPD3 SNRPD3: Small nuclear ribonucleoprotein Sm D3 7.41E4 Evidence
LSM4 LSM3 LSM3, MDS017: U6 snRNA-associated Sm-like protein LSm3 7.41E4 Evidence O
LSM4 SNRPD1 SNRPD1: Small nuclear ribonucleoprotein Sm D1 3.86E4 Evidence
LSM4 COPA COPA: Coatomer subunit alpha 3.64E3 Evidence O
LSM4 SNRPE SNRPE: Small nuclear ribonucleoprotein E 666.0 Evidence
LSM4 LSM8 LSM8: U6 snRNA-associated Sm-like protein LSm8 279.0 Evidence O
LSM4 SNRPF SNRPF, PBSCF: Small nuclear ribonucleoprotein F 279.0 Evidence
LSM4 LSM10 LSM10: U7 snRNA-associated Sm-like protein LSm10 60.60 Evidence
LSM4 PRPF4 PRPF4, PRP4: U4/U6 small nuclear ribonucleoprotein Prp4 60.3 Evidence
LSM4 KIAA0788 ASCC3L1, HELIC2, KIAA0788: U5 small nuclear ribonucleoprotein 200 kDa helicase 28.20 Evidence
LSM4 WDR18 N/A 28.2 Evidence
LSM4 RBBP4 RBBP4, RBAP48: Histone-binding protein RBBP4 28.2 Evidence
LSM4 WDR77 WDR77, HKMT1069, hCG_39991: Androgen receptor cofactor p44 26.70 Evidence
LSM4 PRP19 PRPF19, NMP200, PRP19, SNEV: Pre-mRNA-processing factor 19 22.20 Evidence
LSM4 WDR3 WDR3: WD repeat-containing protein 3 17.00 Evidence
LSM4 TSSC1 TSSC1: Protein TSSC1 17.00 Evidence
LSM4 PAK1IP1 PAK1IP1, PIP1, WDR84: p21-activated protein kinase-interacting protein 1 17.00 Evidence
LSM4 RAD54B RAD54B: DNA repair and recombination protein RAD54B 15.30 Evidence
LSM4 WDR8 WDR8: WD repeat-containing protein 8 15.30 Evidence
LSM4 CSNK2B CSNK2B, CK2N, G5A: Casein kinase II subunit beta 13.40 Evidence
LSM4 DDX47 E4-DBP: DEAD box protein 11.20 Evidence
LSM4 ARPC1B ARC41, ARPC1B: Actin-related protein 2/3 complex subunit 1B 10.10 Evidence
LSM4 DHX35 C20orf15, DHX35, DDX35: Probable ATP-dependent RNA helicase DHX35 10.10 Evidence
LSM4 ISG20 ISG20, HEM45: Interferon-stimulated gene 20 kDa protein 9.29 Evidence
LSM4 REV3L REV3L, POLZ, REV3: DNA polymerase zeta catalytic subunit 7.05 Evidence
LSM4 CORO1B CORO1B: Coronin-1B 6.31 Evidence
LSM4 PTGES3 PTGES3, P23, TEBP: Prostaglandin E synthase 3 6.29 Evidence
LSM4 TDRD4 TDRD4: Tudor domain-containing protein 4 6.11 Evidence
LSM4 DDX53 DDX53, CAGE: Probable ATP-dependent RNA helicase DDX53 6.11 Evidence
LSM4 FLJ12671 ISG20L2, HSD38, HSD-38: Interferon-stimulated 20 kDa exonuclease-like 2 6.11 Evidence
LSM4 EXOSC8 EXOSC8, OIP2, RRP43: Exosome complex exonuclease RRP43 6.09 Evidence
LSM4 SMN2 SMN1, SMN, SMN2, SMNC, SMNT: Survival motor neuron protein 5.47 Evidence
LSM4 TXNL4A TXNL4A, DIM1, TXNL4: Thioredoxin-like protein 4A 3.36 Evidence
LSM4 PRPF8 PRPF8, PRPC8: Pre-mRNA-processing-splicing factor 8 2.64 Evidence
LSM4 SNRPB SNRPB, COD, SNRPB1: Small nuclear ribonucleoprotein-associated proteins B and B' 2.52 Evidence
LSM4 WSB1 WSB1, SWIP1: WD repeat and SOCS box-containing protein 1 2.43 Evidence
LSM4 DDX20 DDX20, DP103, GEMIN3: Probable ATP-dependent RNA helicase DDX20 2.43 Evidence
LSM4 WDR54 N/A 2.43 Evidence
LSM4 GEMIN5 GEMIN5: Gem-associated protein 5 2.43 Evidence
LSM4 DDX43 DDX43, HAGE: Probable ATP-dependent RNA helicase DDX43 2.17 Evidence
LSM4 SART1 SART1: U4/U6.U5 tri-snRNP-associated protein 1 1.6 Evidence
LSM4 SF3A2 SF3A2, SAP62: Splicing factor 3A subunit 2 1.6 Evidence
LSM4 SF3B3 N/A 1.57 Evidence O
LSM4 EIF3S9 EIF3S9: Eukaryotic translation initiation factor 3 subunit 9 1.57 Evidence
LSM4 SF3A3 SF3A3, SAP61: Splicing factor 3A subunit 3 1.29 Evidence O
LSM4 PRPF31 PRPF31, PRP31: U4/U6 small nuclear ribonucleoprotein Prp31 1.10 Evidence
LSM4 HMGN2 HMGN2, HMG17: Non-histone chromosomal protein HMG-17 1.06 Evidence
LSM4 TOP2A TOP2A, TOP2: DNA topoisomerase 2-alpha 1.06 Evidence
LSM4 TBCA TBCA: Tubulin-specific chaperone A 1.05 Evidence